TCM_022397 (Theobroma cacao)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 TCM_022397 T249941_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.939 0.722
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.939 0.722
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.939 0.722
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.933 0.653
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY08082 MADF 113 189

Links

Other MADF family TFs
Other Theobroma cacao TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31501 Aegilops tauschii F775_31501 I 0.871
AMTR_s00006p00265300 Amborella trichopoda AMTR_s00006p00265300 I 0.883
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I 0.922
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I 0.921
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I 0.938
AT3G10030 Arabidopsis thaliana AT3G10030 D 0.939
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I 0.939
BRADI5G08980 Brachypodium distachyon BRADI5G08980 I 0.883
Bo5g137800 Brassica oleracea Bo5g137800 I 0.954
Bra029812 Brassica rapa Bra029812 I 0.954
PK04914.1 Cannabis sativa PK04914.1 D 0.933
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I 0.931
Carubv10015256m.g Capsella rubella Carubv10015256m.g I 0.931
evm.TU.supercontig_128.55 Carica papaya evm.TU.supercontig_128.55 I 0.871
Ca_20148 Cicer arietinum Ca_20148 I 0.941
Cla018015 Citrullus lanatus Cla018015 I 0.947
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I 0.951
Cucsa.378670 Cucumis sativus Cucsa.378670 I 0.947
Eucgr.A01571 Eucalyptus grandis Eucgr.A01571 I 0.939
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I 0.931
gene30101-v1.0-hybrid Fragaria vesca gene30101-v1.0-hybrid I 0.897
GLYMA20G33031 Glycine max GLYMA20G33031 I
GLYMA13G21371 Glycine max GLYMA13G21371 I 0.947
GLYMA10G34520 Glycine max GLYMA10G34520 I 0.886
GLYMA10G07490 Glycine max GLYMA10G07490 I 0.947
Gorai.007G371500 Gossypium raimondii Gorai.007G371500 I 0.966
MLOC_28975 Hordeum vulgare MLOC_28975 I 0.883
LPERR04G08300 Leersia perrieri LPERR04G08300 I 0.869
MDP0000399495 Malus domestica MDP0000399495 I 0.874
MDP0000415733 Malus domestica MDP0000415733 I 0.874
MDP0000201016 Malus domestica MDP0000201016 I 0.874
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I 0.946
MTR_1g061600 Medicago truncatula MTR_1g061600 I 0.941
mgf008067m Mimulus guttatus mgf008067m I 0.899
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I 0.904
OB04G18670 Oryza brachyantha OB04G18670 I 0.871
OGLUM04G11230 Oryza glumaepatula OGLUM04G11230 I 0.883
BGIOSGA016339 Oryza indica BGIOSGA016339 I 0.871
OMERI04G10080 Oryza meridionalis OMERI04G10080 I 0.871
ONIVA04G09510 Oryza nivara ONIVA04G09510 I 0.871
OPUNC04G09570 Oryza punctata OPUNC04G09570 I 0.871
Pavir.J13370 Panicum virgatum Pavir.J13370 I 0.875
Pavir.Gb01778 Panicum virgatum Pavir.Gb01778 I 0.872
POPTR_0006s11850 Populus trichocarpa POPTR_0006s11850 I 0.906
POPTR_0008s02730 Populus trichocarpa POPTR_0008s02730 I 0.840
POPTR_0010s23970 Populus trichocarpa POPTR_0010s23970 I 0.834
Pm026265 Prunus mume Pm026265 I 0.933
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I 0.883
PRUPE_ppa004154mg Prunus persica PRUPE_ppa004154mg I 0.933
28077.m000081 Ricinus communis 28077.m000081 I 0.852
29815.m000504 Ricinus communis 29815.m000504 I 0.940
SapurV1A.0439s0120 Salix purpurea SapurV1A.0439s0120 I 0.832
SapurV1A.0243s0300 Salix purpurea SapurV1A.0243s0300 I 0.832
SapurV1A.0226s0070 Salix purpurea SapurV1A.0226s0070 I 0.906
SELMODRAFT_130409 Selaginella moellendorffii SELMODRAFT_130409 I 0.834
SELMODRAFT_134056 Selaginella moellendorffii SELMODRAFT_134056 I 0.834
Si009787m.g Setaria italica Si009787m.g I 0.870
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I 0.942
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I 0.947
Sb06g015280 Sorghum bicolor Sb06g015280 I 0.866
TCM_043551 Theobroma cacao TCM_043551 I 0.851
Traes_2AL_246006E77 Triticum aestivum Traes_2AL_246006E77 I 0.901
Traes_2BL_83EDE2CBB Triticum aestivum Traes_2BL_83EDE2CBB I 0.901
TRIUR3_22240 Triticum urartu TRIUR3_22240 I 0.871
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I 0.896
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I 0.946
GRMZM2G002978 Zea mays GRMZM2G002978 I 0.873