cassava12982.valid.m1 (Manihot esculenta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 cassava12982.valid.m1 T250455_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava12982.valid.m1 MADF 54 133

Links

Other MADF family TFs
Other Manihot esculenta TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N 0.851
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.901
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.901
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.901
Bo3g037360 Brassica oleracea Bo3g037360 N 0.915
Bo4g023990 Brassica oleracea Bo4g023990 N 0.888
Bra000360 Brassica rapa Bra000360 N 0.915
Bra004859 Brassica rapa Bra004859 N 0.855
PK17306.1 Cannabis sativa PK17306.1 N 0.910
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.912
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.912
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.932
Ca_06795 Cicer arietinum Ca_06795 N 0.930
Ca_06067 Cicer arietinum Ca_06067 N 0.866
Cla021714 Citrullus lanatus Cla021714 N 0.896
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N 0.945
orange1.1g018620m.g Citrus sinensis orange1.1g018620m.g N 0.945
Cucsa.256710 Cucumis sativus Cucsa.256710 N 0.896
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N 0.897
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N 0.942
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.930
GLYMA09G38050 Glycine max GLYMA09G38050 N 0.895
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.869
GLYMA19G29640 Glycine max GLYMA19G29640 N 0.861
Gorai.004G167100 Gossypium raimondii Gorai.004G167100 N 0.926
chr4.CM0739.40.nd Lotus japonicus chr4.CM0739.40.nd N 0.879
MDP0000557282 Malus domestica MDP0000557282 N 0.938
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.895
mgf005560m Mimulus guttatus mgf005560m N 0.862
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.944
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.958
29709.m001180 Ricinus communis 29709.m001180 N 0.942
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.955
Si014062m.g Setaria italica Si014062m.g N 0.813
Solyc01g088820.2 Solanum lycopersicum Solyc01g088820.2 N 0.850
PGSC0003DMG400001696 Solanum tuberosum PGSC0003DMG400001696 N 0.841
TCM_005773 Theobroma cacao TCM_005773 N 0.928
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N 0.889