CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_3g067870
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_3g067870
T254749_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH34708
MADS box
85
131
LSSESNLQVTFSKRRSGLFKKASKFCTRCRAYLALIIFSLGEKVFLF
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.26833s0197
Boechera stricta
Bostr.26833s0197
N
0.702
Cagra.2519s0016
Capsella grandiflora
Cagra.2519s0016
N
0.702
Carubv10028580m.g
Capsella rubella
Carubv10028580m.g
N
0.702
Ca_04665
Cicer arietinum
Ca_04665
N
0.729
Ca_04662
Cicer arietinum
Ca_04662
N
0.702
Ca_04660
Cicer arietinum
Ca_04660
N
0.745
Ca_04659
Cicer arietinum
Ca_04659
N
0.745
GLYMA20G27330
Glycine max
GLYMA20G27330
N
0.745
GLYMA20G27320
Glycine max
GLYMA20G27320
N
0.750
MTR_5g045560
Medicago truncatula
MTR_5g045560
N
0.792
MTR_8g043650
Medicago truncatula
MTR_8g043650
N
0.745
MTR_5g055100
Medicago truncatula
MTR_5g055100
N
0.766
MTR_5g053390
Medicago truncatula
MTR_5g053390
N
0.729
MTR_3g067875
Medicago truncatula
MTR_3g067875
N
0.745
MTR_3g052920
Medicago truncatula
MTR_3g052920
N
0.766
MTR_3g052870
Medicago truncatula
MTR_3g052870
N
0.745
MTR_2g085280
Medicago truncatula
MTR_2g085280
N
0.771
MTR_2g085250
Medicago truncatula
MTR_2g085250
N
0.771
MTR_2g030740
Medicago truncatula
MTR_2g030740
N
0.702
MTR_1g105920
Medicago truncatula
MTR_1g105920
N
0.745
MTR_1g105910
Medicago truncatula
MTR_1g105910
N
0.745
MTR_1g105905
Medicago truncatula
MTR_1g105905
N
0.745
MTR_1g077360
Medicago truncatula
MTR_1g077360
N
0.729
MTR_1g075600
Medicago truncatula
MTR_1g075600
N
0.729
MTR_1g012570
Medicago truncatula
MTR_1g012570
N
0.787
Pm021071
Prunus mume
Pm021071
N
0.702
PRUPE_ppa026127mg
Prunus persica
PRUPE_ppa026127mg
N
0.702
SapurV1A.0019s0690
Salix purpurea
SapurV1A.0019s0690
N
0.702