CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400003055
(
Solanum tuberosum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PGSC0003DMG400003055
T277532_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q948S4_TOBAC
M11073_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBB_01
0.830
0.871
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400007899
Myb
55
114
AGWTEEEDNLLTEVVERFKGRNWKKIGKTIYSVMLYTFQLAECLNGRTDVQCLHRWQKVL
PGSC0003DMT400007899
Myb
120
166
KGPWTKEEDDLIIELVEKHGCKKWSNIANSLPGRIGKQCRERWHNHL
PGSC0003DMT400007899
Myb
172
217
KDAWTEQEELVLCHYHQLYGNKWAKIARFLPGRTDNAIKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Solanum tuberosum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_013_00366
Aquilegia coerulea
Aquca_013_00366
I
0.706
Aquca_001_00435
Aquilegia coerulea
Aquca_001_00435
I
0.691
Cucsa.175460
Cucumis sativus
Cucsa.175460
I
0.661
GLYMA17G26240
Glycine max
GLYMA17G26240
I
0.662
GLYMA14G21523
Glycine max
GLYMA14G21523
I
0.662
Gorai.010G110000
Gossypium raimondii
Gorai.010G110000
I
0.668
MDP0000179225
Malus domestica
MDP0000179225
I
0.670
MTR_3g110028
Medicago truncatula
MTR_3g110028
I
0.663
MTR_1g026870
Medicago truncatula
MTR_1g026870
I
0.668
Q948S4_TOBAC
Nicotiana tabacum
Q948S4_TOBAC
D
0.830
Pm005124
Prunus mume
Pm005124
I
0.670
PRUPE_ppa000676mg
Prunus persica
PRUPE_ppa000676mg
I
0.664
Solyc08g080580.2
Solanum lycopersicum
Solyc08g080580.2
I
0.872
TCM_047091
Theobroma cacao
TCM_047091
I
0.676
TCM_016203
Theobroma cacao
TCM_016203
I
0.667
VIT_04s0008g03780
Vitis vinifera
VIT_04s0008g03780
I
0.664
VIT_11s0016g03750
Vitis vinifera
VIT_11s0016g03750
I
0.681