TCM_033907 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_033907 T280599_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.746 0.774
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.690 0.720
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.675 0.731
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.666 0.763
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.662 0.753
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.662 0.742
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.662 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY14580 Myb 35 81
EOY14580 Myb 87 132

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

254 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI5G17620 Brachypodium distachyon BRADI5G17620 I
Ca_17883 Cicer arietinum Ca_17883 I
LjSGA_100683.2.1 Lotus japonicus LjSGA_100683.2.1 I
MTR_6g088425 Medicago truncatula MTR_6g088425 I
gw1.8.141.1 Physcomitrella patens gw1.8.141.1 D
gw1.55.249.1 Physcomitrella patens gw1.55.249.1 I
gw1.480.6.1 Physcomitrella patens gw1.480.6.1 I
e_gw1.60.212.1 Physcomitrella patens e_gw1.60.212.1 I
estExt_fgenesh1_pg.C_4800009 Physcomitrella patens estExt_fgenesh1_pg.C_4800009 D
gw1.117.121.1 Physcomitrella patens gw1.117.121.1 I
gw1.133.82.1 Physcomitrella patens gw1.133.82.1 I
gw1.14.214.1 Physcomitrella patens gw1.14.214.1 I
gw1.15.199.1 Physcomitrella patens gw1.15.199.1 I
gw1.276.83.1 Physcomitrella patens gw1.276.83.1 I
gw1.296.16.1 Physcomitrella patens gw1.296.16.1 I
Pm027339 Prunus mume Pm027339 I
PRUPE_ppa010130mg Prunus persica PRUPE_ppa010130mg I
SELMODRAFT_69412 Selaginella moellendorffii SELMODRAFT_69412 I
SELMODRAFT_69413 Selaginella moellendorffii SELMODRAFT_69413 I
Traes_2BL_984787AC0 Triticum aestivum Traes_2BL_984787AC0 I
Traes_2AL_0F08552FB Triticum aestivum Traes_2AL_0F08552FB I