Eucgr.K02470 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.K02470 T286985_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB30
M07089_2.00 		Arabidopsis thaliana
NHHHCAACYACYWHH
DDWRGTRGTTGDDDN		 Dap-seq
OMalley et al.(2016)
MYB30_col_a 		0.852 0.935
MYB30
M07090_2.00 		Arabidopsis thaliana
HHHYYHCCAACYAMY
RKTRGTTGGDRRDDD		 Dap-seq
OMalley et al.(2016)
MYB30_colamp_a 		0.852 0.935
MYB60
M07001_2.00 		Arabidopsis thaliana
HNNHYYCAACYACYWHHNN
NNDDWRGTRGTTGRRDNND		 Dap-seq
OMalley et al.(2016)
MYB60_col 		0.832 0.914
MYB94
M02298_2.00 		Arabidopsis thaliana
DACCGGTH
DACCGGTH		 PBM
Weirauch et al.(2014)
pTH7085 		0.829 0.914
MYB94
M07094_2.00 		Arabidopsis thaliana
HHNYHYCAACYACYWHHNN
NNDDWRGTRGTTGRDRNDD		 Dap-seq
OMalley et al.(2016)
MYB94_col_b 		0.829 0.914
ATY13
M07035_2.00 		Arabidopsis thaliana
HAMCHMCCAMCHAHH
DDTDGKTGGKDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_col_a 		0.815 0.925
ATY13
M07036_2.00 		Arabidopsis thaliana
HAMCHHCCAACHAHH
DDTDGTTGGDDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_colamp_a 		0.815 0.925
MYB96
M07153_2.00 		Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN
NDNWRDTRGTTGGDDRDDDDD		 Dap-seq
OMalley et al.(2016)
MYB96_colamp_a 		0.813 0.925
MYB96
M07154_2.00 		Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH
DDDDDTDGKTGGNDGKTR		 Dap-seq
OMalley et al.(2016)
MYB96_col_b 		0.813 0.925
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K02470.1 Myb 14 61
Eucgr.K02470.1 Myb 67 112
Eucgr.K02470.2 Myb 1 36

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

318 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04223 Aegilops tauschii F775_04223 I 0.000
F775_43210 Aegilops tauschii F775_43210 I 0.000
LPERR06G13350 Leersia perrieri LPERR06G13350 N 0.000
LPERR11G15320 Leersia perrieri LPERR11G15320 N 0.000
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.000
OBART02G04930 Oryza barthii OBART02G04930 N 0.000
OBART06G13310 Oryza barthii OBART06G13310 N 0.000
OB06G21580 Oryza brachyantha OB06G21580 N 0.000
ORGLA06G0273400 Oryza glaberrima ORGLA06G0273400 N 0.000
OGLUM06G14250 Oryza glumaepatula OGLUM06G14250 N 0.000
BGIOSGA022830 Oryza indica BGIOSGA022830 N 0.000
OLONG_015132 Oryza longistaminata OLONG_015132 N 0.000
ONIVA06G15960 Oryza nivara ONIVA06G15960 N 0.000
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.000
ORUFI06G14240 Oryza rufipogon ORUFI06G14240 N 0.000
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.000
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.000
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.000
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.000
Si019951m.g Setaria italica Si019951m.g I 0.000
Sb06g015640 Sorghum bicolor Sb06g015640 N 0.000
Sb07g007306 Sorghum bicolor Sb07g007306 N 0.000
Sb07g007373 Sorghum bicolor Sb07g007373 N 0.000
Sb0836s002010 Sorghum bicolor Sb0836s002010 N 0.000
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.000
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.000
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.000
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.000
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.000
GRMZM2G459864 Zea mays GRMZM2G459864 N 0.000