Bo5g137360 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo5g137360 T292418_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.959 0.974
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.959 0.974
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g137360.1 NAC/NAM 29 155

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VRN1 Arabidopsis lyrata fgenesh2_kg.3__2116__AT3G18990.1 I 0.000
VRN1 Arabidopsis thaliana AT3G18990 D 0.000
Bostr.19424s0762 Boechera stricta Bostr.19424s0762 I 0.000
Bo1g115980 Brassica oleracea Bo1g115980 I 0.000
Bo5g116790 Brassica oleracea Bo5g116790 I 0.000
Bra037544 Brassica rapa Bra037544 I 0.000
Cagra.5105s0003 Capsella grandiflora Cagra.5105s0003 I 0.000
Carubv10015637m.g Capsella rubella Carubv10015637m.g I 0.000
Ca_13671 Cicer arietinum Ca_13671 N 0.000
Ca_14825 Cicer arietinum Ca_14825 N 0.000
Ciclev10028642m.g Citrus clementina Ciclev10028642m.g I 0.000
orange1.1g016655m.g Citrus sinensis orange1.1g016655m.g I 0.000
Thhalv10021075m.g Eutrema salsugineum Thhalv10021075m.g I 0.000
gene31955-v1.0-hybrid Fragaria vesca gene31955-v1.0-hybrid I 0.000
GLYMA20G01130 Glycine max GLYMA20G01130 N 0.000
GLYMA07G21160 Glycine max GLYMA07G21160 I 0.000
GLYMA11G13210 Glycine max GLYMA11G13210 N 0.000
GLYMA12G05250 Glycine max GLYMA12G05250 N 0.000
Gorai.013G040000 Gossypium raimondii Gorai.013G040000 I 0.000
Gorai.002G006500 Gossypium raimondii Gorai.002G006500 I 0.000
Gorai.005G240900 Gossypium raimondii Gorai.005G240900 I 0.000
Gorai.012G150900 Gossypium raimondii Gorai.012G150900 I 0.000
Lus10027940.g Linum usitatissimum Lus10027940.g N 0.000
Lus10012041.g Linum usitatissimum Lus10012041.g N 0.000
chr3.LjT23H01.130.nc Lotus japonicus chr3.LjT23H01.130.nc N 0.000
chr2.CM0308.470.nd Lotus japonicus chr2.CM0308.470.nd I 0.000
chr2.CM0262.200.nc Lotus japonicus chr2.CM0262.200.nc I 0.000
MDP0000238744 Malus domestica MDP0000238744 N 0.000
MDP0000555456 Malus domestica MDP0000555456 N 0.000
cassava29880.valid.m1 Manihot esculenta cassava29880.valid.m1 I 0.000
MTR_1g034240 Medicago truncatula MTR_1g034240 N 0.000
POPTR_0004s15400 Populus trichocarpa POPTR_0004s15400 I 0.000
POPTR_0009s11170 Populus trichocarpa POPTR_0009s11170 I 0.000
Pm021537 Prunus mume Pm021537 N 0.000
PRUPE_ppa006275mg Prunus persica PRUPE_ppa006275mg I 0.000
29851.m002498 Ricinus communis 29851.m002498 I 0.000
SapurV1A.0090s0340 Salix purpurea SapurV1A.0090s0340 I 0.000
SapurV1A.0979s0040 Salix purpurea SapurV1A.0979s0040 I 0.000
SapurV1A.2089s0010 Salix purpurea SapurV1A.2089s0010 I 0.000
TCM_006971 Theobroma cacao TCM_006971 I 0.000