GPLIN_001106000 (Globodera pallida)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 GPLIN_001106000 T308686_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.787 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_001106000 Nuclear receptor 187 256

Links

Other Nuclear receptor family TFs
Other Globodera pallida TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.905
nAv.1.0.1.g09235 Acanthocheilonema viteae nAv.1.0.1.g09235 N 0.807
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I 0.988
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.908
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.922
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.769
ANCDUO_09404 Ancylostoma duodenale ANCDUO_09404 N 0.897
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.922
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I 0.801
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.908
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.922
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.840
ASU_01199 Ascaris suum ASU_01199 I 0.755
ASU_04305 Ascaris suum ASU_04305 I 0.989
Bm12053 Brugia malayi Bm12053 I 0.905
Bm2389 Brugia malayi Bm2389 I 0.989
Bm4894 Brugia malayi Bm4894 I 0.905
BTMF_0000225801 Brugia timori BTMF_0000225801 N 0.889
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.905
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.820
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I 0.987
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.847
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.933
CBN07936 Caenorhabditis brenneri CBN07936 I 0.903
CBN13729 Caenorhabditis brenneri CBN13729 I 0.965
CBN18797 Caenorhabditis brenneri CBN18797 I 0.839
CBN20828 Caenorhabditis brenneri CBN20828 I 0.903
CBN25890 Caenorhabditis brenneri CBN25890 N 0.788
CBN26258 Caenorhabditis brenneri CBN26258 I 0.839
CBN31048 Caenorhabditis brenneri CBN31048 I 0.922
CBG06052 Caenorhabditis briggsae CBG06052 I 0.787
CBG17744 Caenorhabditis briggsae CBG17744 I 0.989
CBG19594 Caenorhabditis briggsae CBG19594 I 0.922
CBG19604 Caenorhabditis briggsae CBG19604 I 0.905
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.787
nhr-31 Caenorhabditis elegans WBGene00003625 I 0.988
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.903
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.922
CJA04720 Caenorhabditis japonica CJA04720 I 0.905
CJA08328 Caenorhabditis japonica CJA08328 I 0.988
CRE02711 Caenorhabditis remanei CRE02711 I 0.988
CRE06661 Caenorhabditis remanei CRE06661 I 0.922
CRE06667 Caenorhabditis remanei CRE06667 I 0.903
CRE10161 Caenorhabditis remanei CRE10161 I 0.988
CRE12779 Caenorhabditis remanei CRE12779 I 0.784
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.922
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I 0.988
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.905
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I 0.988
DME_0000188101 Dracunculus medinensis DME_0000188101 I 0.990
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.909
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.903
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I 0.986
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.933
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.905
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.828
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.922
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.908
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.922
HCOI01716000 Haemonchus contortus HCOI01716000 I 0.988
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I 0.988
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.922
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.922
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I 0.989
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.908
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.922
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.905
LOAG_01074 Loa loa LOAG_01074 I 0.989
LOAG_05485 Loa loa LOAG_05485 I 0.905
genemark-nMf.1.1.scaf00140-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00140-processed-gene-0.6 I 0.878
maker-nMf.1.1.scaf03124-snap-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf03124-snap-gene-0.5 N 0.896
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I 0.893
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.933
Minc15420 Meloidogyne incognita Minc15420 I 0.893
NECAME_05125 Necator americanus NECAME_05125 I 0.908
NECAME_12696 Necator americanus NECAME_12696 I 0.922
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.908
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I 0.988
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.922
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.922
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I 0.988
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.908
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.905
nOo.2.0.1.g02048 Onchocerca ochengi nOo.2.0.1.g02048 N 0.959
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.905
WBGene00241236 Onchocerca volvulus WBGene00241236 I 0.983
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.905
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.848
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I 0.988
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.772
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.864
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.906
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.920
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I 0.989
PPA21285 Pristionchus pacificus PPA21285 I 0.920
Ppa-nhr-31 Pristionchus pacificus PPA24219 I 0.989
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I 0.984
RSKR_0000868400 Rhabditophanes kr3021 RSKR_0000868400 N 0.900
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.820
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.908
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.905
L596_g3809 Steinernema carpocapsae L596_g3809 I 0.988
L889_g29204 Steinernema feltiae L889_g29204 I 0.903
L889_g5777 Steinernema feltiae L889_g5777 I 0.820
L889_g8361 Steinernema feltiae L889_g8361 I 0.908
L889_g8621 Steinernema feltiae L889_g8621 I 0.988
L893_g27201 Steinernema glaseri L893_g27201 I 0.988
L893_g29388 Steinernema glaseri L893_g29388 I 0.820
L893_g32432 Steinernema glaseri L893_g32432 I 0.745
L893_g6878 Steinernema glaseri L893_g6878 I 0.903
L898_g10316 Steinernema monticolum L898_g10316 I 0.908
L898_g24498 Steinernema monticolum L898_g24498 I 0.820
L898_g2799 Steinernema monticolum L898_g2799 I 0.988
L898_g4801 Steinernema monticolum L898_g4801 I 0.903
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.857
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I 0.970
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.906
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.864
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.906
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I 0.970
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.864
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.857
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.857
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.864
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.906
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I 0.970
SMUV_0000212501 Syphacia muris SMUV_0000212501 I 0.986
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.856
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.922
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.922
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.905
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.905