cassava14439.m1 (Manihot esculenta)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 cassava14439.m1 T315872_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava14439.m1 PLATZ 62 133

Links

Other PLATZ family TFs
Other Manihot esculenta TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.792
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.708
Aquca_013_00703 Aquilegia coerulea Aquca_013_00703 N 0.750
fgenesh2_kg.5__2532__AT3G60670.1 Arabidopsis lyrata fgenesh2_kg.5__2532__AT3G60670.1 N 0.736
AT3G60670 Arabidopsis thaliana AT3G60670 N 0.736
Bostr.13158s0066 Boechera stricta Bostr.13158s0066 N 0.722
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N 0.708
Bo4g104880 Brassica oleracea Bo4g104880 N 0.708
Bra014478 Brassica rapa Bra014478 N 0.708
PK22765.1 Cannabis sativa PK22765.1 N 0.719
PK01122.1 Cannabis sativa PK01122.1 N 0.847
Cagra.6011s0013 Capsella grandiflora Cagra.6011s0013 N 0.722
Carubv10019494m.g Capsella rubella Carubv10019494m.g N 0.722
evm.TU.supercontig_145.1 Carica papaya evm.TU.supercontig_145.1 N 0.847
evm.TU.supercontig_29.132 Carica papaya evm.TU.supercontig_29.132 N 0.736
Cla006768 Citrullus lanatus Cla006768 N 0.833
Cucsa.120560 Cucumis sativus Cucsa.120560 N 0.833
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.708
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.806
Eucgr.E01501 Eucalyptus grandis Eucgr.E01501 N 0.778
Thhalv10006374m.g Eutrema salsugineum Thhalv10006374m.g N 0.722
gene30812-v1.0-hybrid Fragaria vesca gene30812-v1.0-hybrid N 0.708
GLYMA01G17580 Glycine max GLYMA01G17580 N 0.875
GLYMA11G17770 Glycine max GLYMA11G17770 N 0.847
Gorai.004G110400 Gossypium raimondii Gorai.004G110400 N 0.708
Gorai.001G174900 Gossypium raimondii Gorai.001G174900 N 0.806
Gorai.003G169800 Gossypium raimondii Gorai.003G169800 N 0.764
Gorai.004G163500 Gossypium raimondii Gorai.004G163500 N 0.819
Gorai.007G089600 Gossypium raimondii Gorai.007G089600 N 0.861
Gorai.008G237000 Gossypium raimondii Gorai.008G237000 N 0.778
MLOC_37403 Hordeum vulgare MLOC_37403 N 0.708
LPERR02G05550 Leersia perrieri LPERR02G05550 N 0.708
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.708
Lus10009283.g Linum usitatissimum Lus10009283.g N 0.750
Lus10015881.g Linum usitatissimum Lus10015881.g N 0.736
MDP0000639526 Malus domestica MDP0000639526 N 0.708
cassava17724.valid.m1 Manihot esculenta cassava17724.valid.m1 N 0.931
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.708
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N 0.736
OB02G15630 Oryza brachyantha OB02G15630 N 0.708
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N 0.708
BGIOSGA007009 Oryza indica BGIOSGA007009 N 0.708
OPUNC02G05490 Oryza punctata OPUNC02G05490 N 0.708
OS02G0183000 Oryza sativa OS02G0183000 N 0.708
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.736
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.722
POPTR_0002s14570 Populus trichocarpa POPTR_0002s14570 N 0.708
POPTR_0014s05840 Populus trichocarpa POPTR_0014s05840 N 0.750
Pm027672 Prunus mume Pm027672 N 0.708
Pm017841 Prunus mume Pm017841 N 0.792
PRUPE_ppa019806mg Prunus persica PRUPE_ppa019806mg N 0.708
PRUPE_ppa023785mg Prunus persica PRUPE_ppa023785mg N 0.792
30174.m008836 Ricinus communis 30174.m008836 N 0.917
SapurV1A.0382s0270 Salix purpurea SapurV1A.0382s0270 N 0.750
SapurV1A.0033s0510 Salix purpurea SapurV1A.0033s0510 N 0.708
Si019544m.g Setaria italica Si019544m.g N 0.708
Si018139m.g Setaria italica Si018139m.g N 0.722
Solyc01g091000.2 Solanum lycopersicum Solyc01g091000.2 N 0.819
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.708
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.722
TCM_005554 Theobroma cacao TCM_005554 N 0.833
TCM_016018 Theobroma cacao TCM_016018 N 0.806
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N 0.708
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N 0.708
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N 0.708
TRIUR3_16881 Triticum urartu TRIUR3_16881 N 0.708
VIT_00s0233g00100 Vitis vinifera VIT_00s0233g00100 N 0.806
VIT_02s0154g00150 Vitis vinifera VIT_02s0154g00150 N 0.833
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N 0.861
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.708
GRMZM2G070295 Zea mays GRMZM2G070295 N 0.708