HMEL013517 (Heliconius melpomene)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 HMEL013517 T321997_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DEAF1
M11266_2.00 		Pan troglodytes Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEAF1_01 		0.915 0.653
DEAF1
M11267_2.00 		Pan troglodytes Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEAF1_02 		0.915 0.653
Deaf1
M06445_2.00 		Drosophila melanogaster
VMCGAR
YTCGKB		 B1H
Zhu et al.(2011)
Deaf1_FlyReg_FBgn0013799 		0.866 0.653
Deaf1
M07544_2.00 		Drosophila melanogaster
VMCGAR
YTCGKB		 DNaseI footprinting
Mathelier et al.(2014)
MA0185.1 		0.866 0.653
Deaf1
M11268_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$DEAF_01 		0.866 0.653
Deaf1
M11269_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$DEAF1_Q6 		0.866 0.653
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HMEL013517-PA SAND 148 222

Links

Other SAND family TFs
Other Heliconius melpomene TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK28293.1 Cannabis sativa PK28293.1 N
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N
Cla005911 Citrullus lanatus Cla005911 N
Ciclev10015354m.g Citrus clementina Ciclev10015354m.g N
orange1.1g022806m.g Citrus sinensis orange1.1g022806m.g N
Cucsa.026600 Cucumis sativus Cucsa.026600 N
Eucgr.G02067 Eucalyptus grandis Eucgr.G02067 N
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N
GLYMA05G26790 Glycine max GLYMA05G26790 N
GLYMA08G09780 Glycine max GLYMA08G09780 N
Gorai.012G183100 Gossypium raimondii Gorai.012G183100 N
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N
Gorai.005G154200 Gossypium raimondii Gorai.005G154200 N
Lus10040427.g Linum usitatissimum Lus10040427.g N
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N
MDP0000320521 Malus domestica MDP0000320521 N
cassava39873.m1 Manihot esculenta cassava39873.m1 N
cassava18078.valid.m1 Manihot esculenta cassava18078.valid.m1 N
cassava18077.valid.m1 Manihot esculenta cassava18077.valid.m1 N
OMERI10G00680 Oryza meridionalis OMERI10G00680 I
C1orf35 Otolemur garnettii ENSOGAG00000010978 I
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N
Pm005924 Prunus mume Pm005924 N
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I
29780.m001393 Ricinus communis 29780.m001393 N
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N
TCM_011212 Theobroma cacao TCM_011212 N
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I
VIT_01s0011g06380 Vitis vinifera VIT_01s0011g06380 N