AACERI_AaceriAGL073CA (Saccharomycetaceae sp ashbya aceri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 AACERI_AaceriAGL073CA T326244_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IXR1
M08429_2.00 		Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG		 ChIP-chip
Mathelier et al.(2014)
MA0323.1 		0.639 0.735
IXR1
M11345_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$IXR1_01 		0.639 0.735
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AGO13797 Sox 209 277
AGO13797 Sox 282 348

Links

Other Sox family TFs
Other Saccharomycetaceae sp ashbya aceri TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02744 Aegilops tauschii F775_02744 I
F775_08948 Aegilops tauschii F775_08948 I
F775_33173 Aegilops tauschii F775_33173 I
F775_42298 Aegilops tauschii F775_42298 I
AMTR_s00176p00025440 Amborella trichopoda AMTR_s00176p00025440 I
Aquca_001_00047 Aquilegia coerulea Aquca_001_00047 I
Aquca_001_00485 Aquilegia coerulea Aquca_001_00485 I
Aquca_002_01276 Aquilegia coerulea Aquca_002_01276 I
AT-HSFA8 Arabidopsis lyrata Al_scaffold_0002_1461 I
AT-HSFA9 Arabidopsis lyrata fgenesh2_kg.8__1300__AT5G54070.1 I
scaffold_702717.1 Arabidopsis lyrata scaffold_702717.1 I
HSFA9 Arabidopsis thaliana AT5G54070 I
AGOS_AGL073CA Ashbya gossypii AGOS_AGL073CA I 0.741
Bostr.13158s0337 Boechera stricta Bostr.13158s0337 I
Bostr.20129s0193 Boechera stricta Bostr.20129s0193 I
Bostr.26959s0010 Boechera stricta Bostr.26959s0010 I
BRADI1G38140 Brachypodium distachyon BRADI1G38140 I
BRADI1G69407 Brachypodium distachyon BRADI1G69407 I
BRADI2G44050 Brachypodium distachyon BRADI2G44050 I
BRADI2G48990 Brachypodium distachyon BRADI2G48990 I
BRADI2G49860 Brachypodium distachyon BRADI2G49860 I
BRADI3G08870 Brachypodium distachyon BRADI3G08870 I
Bo1g007320 Brassica oleracea Bo1g007320 I
Bo1g021700 Brassica oleracea Bo1g021700 I
Bo6g106450 Brassica oleracea Bo6g106450 I
Bra002882 Brassica rapa Bra002882 I
Bra004272 Brassica rapa Bra004272 I
Bra013253 Brassica rapa Bra013253 I
Bra013406 Brassica rapa Bra013406 I
Bra022949 Brassica rapa Bra022949 I
Bra030021 Brassica rapa Bra030021 I
CAGL0L02013g Candida glabrata CAGL0L02013g I 0.629
PK03562.1 Cannabis sativa PK03562.1 I
Cagra.0096s0075 Capsella grandiflora Cagra.0096s0075 I
Cagra.13025s0005 Capsella grandiflora Cagra.13025s0005 I
Cagra.13025s0006 Capsella grandiflora Cagra.13025s0006 I
Cagra.7254s0011 Capsella grandiflora Cagra.7254s0011 I
Carubv10007333m.g Capsella rubella Carubv10007333m.g I
Carubv10007409m.g Capsella rubella Carubv10007409m.g I
Carubv10021131m.g Capsella rubella Carubv10021131m.g I
Carubv10024599m.g Capsella rubella Carubv10024599m.g I
evm.TU.supercontig_2.169 Carica papaya evm.TU.supercontig_2.169 I
evm.TU.supercontig_28.162 Carica papaya evm.TU.supercontig_28.162 I
evm.TU.supercontig_43.94 Carica papaya evm.TU.supercontig_43.94 I
evm.TU.supercontig_52.116 Carica papaya evm.TU.supercontig_52.116 I
evm.TU.supercontig_7.163 Carica papaya evm.TU.supercontig_7.163 I
Cla009775 Citrullus lanatus Cla009775 I
Cla017103 Citrullus lanatus Cla017103 I
Cla019941 Citrullus lanatus Cla019941 I
Ciclev10006902m.g Citrus clementina Ciclev10006902m.g I
Ciclev10008116m.g Citrus clementina Ciclev10008116m.g I
Ciclev10015541m.g Citrus clementina Ciclev10015541m.g I
Ciclev10016707m.g Citrus clementina Ciclev10016707m.g I
orange1.1g011260m.g Citrus sinensis orange1.1g011260m.g I
orange1.1g016378m.g Citrus sinensis orange1.1g016378m.g I
orange1.1g018107m.g Citrus sinensis orange1.1g018107m.g I
EDEG_00778 Edhazardia aedis EDEG_00778 I
Ecym_7252 Eremothecium cymbalariae Ecym_7252 I 0.732
Eucgr.A01544 Eucalyptus grandis Eucgr.A01544 I
Eucgr.H03412 Eucalyptus grandis Eucgr.H03412 I
Thhalv10026540m.g Eutrema salsugineum Thhalv10026540m.g I
GLYMA01G34490 Glycine max GLYMA01G34490 I
GLYMA04G05500 Glycine max GLYMA04G05500 I
GLYMA10G03530 Glycine max GLYMA10G03530 I
GLYMA10G38930 Glycine max GLYMA10G38930 I
GLYMA13G24860 Glycine max GLYMA13G24860 I
GLYMA14G11030 Glycine max GLYMA14G11030 I
GLYMA17G34540 Glycine max GLYMA17G34540 I
GLYMA19G37585 Glycine max GLYMA19G37585 I
Gorai.001G012700 Gossypium raimondii Gorai.001G012700 I
Gorai.006G087100 Gossypium raimondii Gorai.006G087100 I
Gorai.006G242400 Gossypium raimondii Gorai.006G242400 I
Gorai.008G170800 Gossypium raimondii Gorai.008G170800 I
Gorai.009G024700 Gossypium raimondii Gorai.009G024700 I
Gorai.N013300 Gossypium raimondii Gorai.N013300 I
MLOC_11453 Hordeum vulgare MLOC_11453 I
MLOC_63532 Hordeum vulgare MLOC_63532 I
MLOC_68417 Hordeum vulgare MLOC_68417 I
MLOC_73300 Hordeum vulgare MLOC_73300 I
MLOC_74270 Hordeum vulgare MLOC_74270 I
KAFR_0J00330 Kazachstania africana KAFR_0J00330 I 0.664
KNAG_0A07060 Kazachstania naganishii KNAG_0A07060 I 0.655
KLLA0_E18481g Kluyveromyces lactis KLLA0_E18481g I 0.612
KLTH0D06908g Kluyveromyces thermotolerans KLTH0D06908g I 0.650
Kwal_8043 Kluyveromyces waltii Kwal_8043 I 0.649
SAKL0A09548g Lachancea kluyveri SAKL0A09548g I 0.596
LALA0_S02e01376g Lachancea lanzarotensis LALA0_S02e01376g I 0.638
KLTH0D06908g Lachancea thermotolerans KLTH0D06908g I 0.650
LPERR01G25670 Leersia perrieri LPERR01G25670 I
LPERR02G08320 Leersia perrieri LPERR02G08320 I
LPERR03G08060 Leersia perrieri LPERR03G08060 I
LPERR06G14980 Leersia perrieri LPERR06G14980 I
Lus10011185.g Linum usitatissimum Lus10011185.g I
chr5.CM0024.490.nc Lotus japonicus chr5.CM0024.490.nc I
LjSGA_015162.2 Lotus japonicus LjSGA_015162.2 I
LjSGA_040741.1 Lotus japonicus LjSGA_040741.1 I
LjSGA_070932.1 Lotus japonicus LjSGA_070932.1 I
MDP0000156088 Malus domestica MDP0000156088 I
MDP0000163338 Malus domestica MDP0000163338 I
MDP0000191541 Malus domestica MDP0000191541 I
MDP0000194672 Malus domestica MDP0000194672 I
MDP0000239602 Malus domestica MDP0000239602 I
MDP0000302966 Malus domestica MDP0000302966 I
MDP0000456290 Malus domestica MDP0000456290 I
MDP0000498229 Malus domestica MDP0000498229 I
MDP0000746803 Malus domestica MDP0000746803 I
cassava14176.m1 Manihot esculenta cassava14176.m1 I
cassava18058.valid.m1 Manihot esculenta cassava18058.valid.m1 I
cassava31881.m1 Manihot esculenta cassava31881.m1 I
cassava3537.m1 Manihot esculenta cassava3537.m1 I
cassava41329.m1 Manihot esculenta cassava41329.m1 I
MTR_1g071360 Medicago truncatula MTR_1g071360 I
MTR_2g017890 Medicago truncatula MTR_2g017890 I
estExt_fgenesh1_pg.C_130266 Micromonas pusilla estExt_fgenesh1_pg.C_130266 I
est_cluster_kg.Chr_10__40__3200271:1 Micromonas sp RCC299 est_cluster_kg.Chr_10__40__3200271:1 I
EuGene.0200010072 Micromonas sp RCC299 EuGene.0200010072 I
mg018073m Mimulus guttatus mg018073m I
mgf018900m Mimulus guttatus mgf018900m I
GSMUA_Achr10G27810_001 Musa acuminata GSMUA_Achr10G27810_001 I
GSMUA_Achr2G16660_001 Musa acuminata GSMUA_Achr2G16660_001 I
GSMUA_Achr3G31860_001 Musa acuminata GSMUA_Achr3G31860_001 I
GSMUA_Achr6G00960_001 Musa acuminata GSMUA_Achr6G00960_001 I
NCAS_0A04790 Naumovozyma castellii NCAS_0A04790 I 0.635
NDAI_0K01850 Naumovozyma dairenensis NDAI_0K01850 I 0.635
OBART01G29920 Oryza barthii OBART01G29920 I
OBART02G17360 Oryza barthii OBART02G17360 I
OBART02G33140 Oryza barthii OBART02G33140 I
OBART03G08980 Oryza barthii OBART03G08980 I
OBART06G18200 Oryza barthii OBART06G18200 I
OBART06G18790 Oryza barthii OBART06G18790 I
OB01G38820 Oryza brachyantha OB01G38820 I
OB02G25250 Oryza brachyantha OB02G25250 I
OB03G19170 Oryza brachyantha OB03G19170 I
OB06G25820 Oryza brachyantha OB06G25820 I
ORGLA01G0245200 Oryza glaberrima ORGLA01G0245200 I
ORGLA03G0087100 Oryza glaberrima ORGLA03G0087100 I
OGLUM03G09110 Oryza glumaepatula OGLUM03G09110 I
OGLUM06G19290 Oryza glumaepatula OGLUM06G19290 I
BGIOSGA004402 Oryza indica BGIOSGA004402 I
BGIOSGA012151 Oryza indica BGIOSGA012151 I
BGIOSGA021054 Oryza indica BGIOSGA021054 I
OLONG_002235 Oryza longistaminata OLONG_002235 I
OLONG_002367 Oryza longistaminata OLONG_002367 I
OLONG_008747 Oryza longistaminata OLONG_008747 I
OLONG_023280 Oryza longistaminata OLONG_023280 I
OMERI01G27390 Oryza meridionalis OMERI01G27390 I
OMERI03G08410 Oryza meridionalis OMERI03G08410 I
OMERI06G18730 Oryza meridionalis OMERI06G18730 I
ONIVA06G01190 Oryza nivara ONIVA06G01190 I
ONIVA06G21600 Oryza nivara ONIVA06G21600 I
OPUNC01G29770 Oryza punctata OPUNC01G29770 I
OPUNC03G08660 Oryza punctata OPUNC03G08660 I
OPUNC06G16360 Oryza punctata OPUNC06G16360 I
ORUFI01G33030 Oryza rufipogon ORUFI01G33030 I
ORUFI03G09120 Oryza rufipogon ORUFI03G09120 I
ORUFI06G19310 Oryza rufipogon ORUFI06G19310 I
HSFC1B Oryza sativa OS01G0733200 I
HSFA9 Oryza sativa OS03G0224700 I
OS03G0745000 Oryza sativa OS03G0745000 I
Contig10067.0.g63 Oxytricha trifallax Contig10067.0.g63 I
Contig10723.0.g13 Oxytricha trifallax Contig10723.0.g13 I
Contig731.1.g124 Oxytricha trifallax Contig731.1.g124 I
Pavir.Aa02860 Panicum virgatum Pavir.Aa02860 I
Pavir.Ab00907 Panicum virgatum Pavir.Ab00907 I
Pavir.Da00715 Panicum virgatum Pavir.Da00715 I
Pavir.Ea02962 Panicum virgatum Pavir.Ea02962 I
Pavir.Eb03132 Panicum virgatum Pavir.Eb03132 I
Pavir.Ib00928 Panicum virgatum Pavir.Ib00928 I
Pavir.J17014 Panicum virgatum Pavir.J17014 I
Pavir.J19794 Panicum virgatum Pavir.J19794 I
Pavir.J36148 Panicum virgatum Pavir.J36148 I
GSPATT00030420001 Paramecium tetraurelia GSPATT00030420001 I
PDK_20s1361211g001 Phoenix dactylifera PDK_20s1361211g001 I
PDK_20s1396361g002 Phoenix dactylifera PDK_20s1396361g002 I
PDK_20s1831761g001 Phoenix dactylifera PDK_20s1831761g001 I
POPTR_0004s04260 Populus trichocarpa POPTR_0004s04260 I
POPTR_0010s09210 Populus trichocarpa POPTR_0010s09210 I
POPTR_0013s07740 Populus trichocarpa POPTR_0013s07740 I
Pm005887 Prunus mume Pm005887 I
Pm010031 Prunus mume Pm010031 I
PRUPE_ppa006514mg Prunus persica PRUPE_ppa006514mg I
PRUPE_ppa011804mg Prunus persica PRUPE_ppa011804mg I
29851.m002407 Ricinus communis 29851.m002407 I
SU7_2018 Saccharomyces arboricola SU7_2018 I 0.639
14658_YKL032C Saccharomyces bayanus 14658_YKL032C I 0.639
IXR1 Saccharomyces cerevisiae YKL032C D 0.639
13553_YKL032C Saccharomyces mikatae 13553_YKL032C I 0.639
13606_Multiple Saccharomyces paradoxus 13606_Multiple I 0.521
SapurV1A.0012s0230 Salix purpurea SapurV1A.0012s0230 I
SapurV1A.0032s0100 Salix purpurea SapurV1A.0032s0100 I
SapurV1A.3168s0020 Salix purpurea SapurV1A.3168s0020 I
Si001439m.g Setaria italica Si001439m.g I
Si002580m.g Setaria italica Si002580m.g I
Si035840m.g Setaria italica Si035840m.g I
Solyc06g072750.2 Solanum lycopersicum Solyc06g072750.2 I
Solyc09g059520.2 Solanum lycopersicum Solyc09g059520.2 I
PGSC0003DMG400017484 Solanum tuberosum PGSC0003DMG400017484 I
PGSC0003DMG400019344 Solanum tuberosum PGSC0003DMG400019344 I
Sb01g042370 Sorghum bicolor Sb01g042370 I
Sb03g033750 Sorghum bicolor Sb03g033750 I
Sb03g034630 Sorghum bicolor Sb03g034630 I
Sb10g021800 Sorghum bicolor Sb10g021800 I
TBLA_0G02260 Tetrapisispora blattae TBLA_0G02260 I 0.649
TPHA_0G03540 Tetrapisispora phaffii TPHA_0G03540 I 0.619
AMSG_01638 Thecamonas trahens AMSG_01638 I
TCM_011279 Theobroma cacao TCM_011279 I
TCM_020700 Theobroma cacao TCM_020700 I
TCM_029886 Theobroma cacao TCM_029886 I
TCM_037635 Theobroma cacao TCM_037635 I
TDEL_0A03100 Torulaspora delbrueckii TDEL_0A03100 I 0.655
Traes_2AL_D3B2C21A7 Triticum aestivum Traes_2AL_D3B2C21A7 I
TRAES3BF021000010CFD_g Triticum aestivum TRAES3BF021000010CFD_g I
TRAES3BF025700030CFD_g Triticum aestivum TRAES3BF025700030CFD_g I
TRAES3BF025700050CFD_g Triticum aestivum TRAES3BF025700050CFD_g I
TRAES3BF029100010CFD_g Triticum aestivum TRAES3BF029100010CFD_g I
TRAES3BF071100100CFD_g Triticum aestivum TRAES3BF071100100CFD_g I
Traes_4DL_66D0047A7 Triticum aestivum Traes_4DL_66D0047A7 I
Traes_4DL_9A51D1EB2 Triticum aestivum Traes_4DL_9A51D1EB2 I
Traes_4DL_FA07D8414 Triticum aestivum Traes_4DL_FA07D8414 I
Traes_4DS_A980F512E Triticum aestivum Traes_4DS_A980F512E I
Traes_5AL_D369204D3 Triticum aestivum Traes_5AL_D369204D3 I
Traes_6BS_25E162197 Triticum aestivum Traes_6BS_25E162197 I
Traes_7BS_03F39ED94 Triticum aestivum Traes_7BS_03F39ED94 I
TRIUR3_12841 Triticum urartu TRIUR3_12841 I
TRIUR3_19198 Triticum urartu TRIUR3_19198 I
TRIUR3_24476 Triticum urartu TRIUR3_24476 I
TRIUR3_33712 Triticum urartu TRIUR3_33712 I
TRIUR3_34250 Triticum urartu TRIUR3_34250 I
Kpol_348p11 Vanderwaltozyma polyspora Kpol_348p11 I 0.619
estExt_fgenesh4_pg.C_530076 Volvox carteri estExt_fgenesh4_pg.C_530076 I
GRMZM2G003489 Zea mays GRMZM2G003489 I
GRMZM2G026742 Zea mays GRMZM2G026742 I
GRMZM2G118453 Zea mays GRMZM2G118453 I
GRMZM2G118485 Zea mays GRMZM2G118485 I
ZBAI_03824 Zygosaccharomyces bailii ZBAI_03824 I 0.658
ZBAI_09505 Zygosaccharomyces bailii ZBAI_09505 I 0.658
ZYRO0B02068g Zygosaccharomyces rouxii ZYRO0B02068g I 0.639