BN7_2978 (Wickerhamomyces ciferrii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 BN7_2978 T326624_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMO1
M11344_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$_HMO1_01 		0.613 0.768
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCH43430 Sox 138 211

Links

Other Sox family TFs
Other Wickerhamomyces ciferrii TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_027_00267 Aquilegia coerulea Aquca_027_00267 N
fgenesh2_kg.397__1__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.397__1__AT3G24310.1 N
MYB59 Arabidopsis thaliana AT5G59780 D
ATMYB48 Arabidopsis thaliana AT3G46130 I
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I
Carubv10027237m.g Capsella rubella Carubv10027237m.g N
Ca_16710 Cicer arietinum Ca_16710 N
Cucsa.213500 Cucumis sativus Cucsa.213500 I
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N
Eucgr.B02401 Eucalyptus grandis Eucgr.B02401 N
Thhalv10022197m.g Eutrema salsugineum Thhalv10022197m.g N
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I
GLYMA11G15180 Glycine max GLYMA11G15180 I
GLYMA12G07110 Glycine max GLYMA12G07110 I
GLYMA13G40830 Glycine max GLYMA13G40830 I
GLYMA15G04620 Glycine max GLYMA15G04620 I
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I
MLOC_52439 Hordeum vulgare MLOC_52439 I
MLOC_78504 Hordeum vulgare MLOC_78504 I
Lus10040861.g Linum usitatissimum Lus10040861.g N
cassava13590.valid.m1 Manihot esculenta cassava13590.valid.m1 N
cassava29437.valid.m1 Manihot esculenta cassava29437.valid.m1 N
MTR_4g063100 Medicago truncatula MTR_4g063100 I
MTR_2g096380 Medicago truncatula MTR_2g096380 I
Pavir.J33560 Panicum virgatum Pavir.J33560 I
Pavir.J11500 Panicum virgatum Pavir.J11500 I
Pavir.J08441 Panicum virgatum Pavir.J08441 I
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I
Pavir.Gb02200 Panicum virgatum Pavir.Gb02200 I
Pavir.Hb00058 Panicum virgatum Pavir.Hb00058 I
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I
Si026803m.g Setaria italica Si026803m.g I
Si023104m.g Setaria italica Si023104m.g I
Solyc06g075660.2 Solanum lycopersicum Solyc06g075660.2 N
Solyc06g005310.2 Solanum lycopersicum Solyc06g005310.2 N
PGSC0003DMG401010883 Solanum tuberosum PGSC0003DMG401010883 N
PGSC0003DMG400015536 Solanum tuberosum PGSC0003DMG400015536 I
PGSC0003DMG400030397 Solanum tuberosum PGSC0003DMG400030397 N
Sb08g018580 Sorghum bicolor Sb08g018580 I
Sb05g027370 Sorghum bicolor Sb05g027370 N
Traes_2DL_77F235694 Triticum aestivum Traes_2DL_77F235694 N
Traes_1BS_060C24872 Triticum aestivum Traes_1BS_060C24872 N
GRMZM2G048136 Zea mays GRMZM2G048136 I
GRMZM2G130149 Zea mays GRMZM2G130149 I