CY34DRAFT_28710 (Suillus luteus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CY34DRAFT_28710 T327281_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.447 0.435
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.447 0.435
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.447 0.435
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.447 0.435
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.447 0.435
ste11
M11342_2.00 		Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW
WWDNDAACAAAGAAANWH		 Transfac
Matys et al.(2006)
F$STE11_01 		0.442 0.348
ste11
M11343_2.00 		Schizosaccharomyces pombe Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$STE11_02 		0.442 0.348
cic
M06452_2.00 		Drosophila melanogaster
YYCATTSA
TSAATGRR		 B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386 		0.434 0.333
Cic
M00195_2.00 		Mus musculus
NNTGCTGABN
NVTCAGCANN		 PBM
Badis et al.(2009)
Cic_3454 		0.428 0.319
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIK40639 Sox 2 71

Links

Other Sox family TFs
Other Suillus luteus TFs

462 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_27111 Aegilops tauschii F775_27111 I 0.000
BRADI4G35610 Brachypodium distachyon BRADI4G35610 I 0.000
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.000
LPERR09G12950 Leersia perrieri LPERR09G12950 I 0.000
OBART09G16810 Oryza barthii OBART09G16810 I 0.000
OBART09G16830 Oryza barthii OBART09G16830 I 0.000
ORGLA08G0220100 Oryza glaberrima ORGLA08G0220100 I 0.000
OGLUM09G17430 Oryza glumaepatula OGLUM09G17430 I 0.000
DREB1A Oryza indica BGIOSGA029415 I 0.000
OMERI09G12490 Oryza meridionalis OMERI09G12490 I 0.000
ONIVA09G17900 Oryza nivara ONIVA09G17900 I 0.000
OPUNC09G15290 Oryza punctata OPUNC09G15290 I 0.000
OPUNC09G15260 Oryza punctata OPUNC09G15260 I 0.000
ORUFI09G18210 Oryza rufipogon ORUFI09G18210 I 0.000
DREB1A Oryza sativa OS09G0522200 D 0.000
Pavir.J32829 Panicum virgatum Pavir.J32829 N 0.000
Pavir.J27101 Panicum virgatum Pavir.J27101 I 0.000
Pavir.J03893 Panicum virgatum Pavir.J03893 I 0.000
Pavir.J03891 Panicum virgatum Pavir.J03891 I 0.000
Pavir.Fb02246 Panicum virgatum Pavir.Fb02246 I 0.000
Pavir.Fa00114 Panicum virgatum Pavir.Fa00114 N 0.000
Pavir.Ba01281 Panicum virgatum Pavir.Ba01281 I 0.000
Pavir.Ba01280 Panicum virgatum Pavir.Ba01280 I 0.000
Si031001m.g Setaria italica Si031001m.g I 0.000
Si030998m.g Setaria italica Si030998m.g I 0.000
Sb07g025210 Sorghum bicolor Sb07g025210 N 0.000
Sb05g006275 Sorghum bicolor Sb05g006275 I 0.000
Sb02g030340 Sorghum bicolor Sb02g030340 I 0.000
Sb02g030330 Sorghum bicolor Sb02g030330 I 0.000
Sb02g030320 Sorghum bicolor Sb02g030320 I 0.000
Traes_5BL_5299B6B33 Triticum aestivum Traes_5BL_5299B6B33 N 0.000
Traes_5BL_D16B19610 Triticum aestivum Traes_5BL_D16B19610 I 0.000
GRMZM2G175856 Zea mays GRMZM2G175856 N 0.000
Q8GZQ2_MAIZE Zea mays Q8GZQ2_MAIZE D 0.000
GRMZM2G069082 Zea mays GRMZM2G069082 I 0.000
GRMZM2G069126 Zea mays GRMZM2G069126 I 0.000
GRMZM2G069146 Zea mays GRMZM2G069146 I 0.000
GRMZM2G124011 Zea mays GRMZM2G124011 I 0.000
GRMZM2G124037 Zea mays GRMZM2G124037 I 0.000