DAPPUDRAFT_19853 (Daphnia pulex)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 DAPPUDRAFT_19853 T327314_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.425 0.377
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX60405 Sox 18 86

Links

Other Sox family TFs
Other Daphnia pulex TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.656
ACYPI001480 Acyrthosiphon pisum ACYPI001480 N 0.422
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.709
ENSAPLG00000003986 Anas platyrhynchos ENSAPLG00000003986 N 0.453
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N 0.481
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N 0.481
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N 0.481
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N 0.481
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N 0.481
ASIM_0001958001 Anisakis simplex ASIM_0001958001 N 0.599
AALB006415 Anopheles albimanus AALB006415 I 0.707
AARA010616 Anopheles arabiensis AARA010616 I 0.707
AATE016215 Anopheles atroparvus AATE016215 I 0.707
ACUA004409 Anopheles culicifacies ACUA004409 I 0.707
ADAC003252 Anopheles darlingi ADAC003252 I 0.707
AEPI010254 Anopheles epiroticus AEPI010254 N 0.532
AFAF011136 Anopheles farauti AFAF011136 I 0.707
AFUN005717 Anopheles funestus AFUN005717 N 0.530
AGAP000281 Anopheles gambiae AGAP000281 I 0.707
AMAM014030 Anopheles maculatus AMAM014030 N 0.532
AMEC012857 Anopheles melas AMEC012857 I 0.707
AMEM006878 Anopheles merus AMEM006878 I 0.707
AMIN005634 Anopheles minimus AMIN005634 N 0.538
ASIS016667 Anopheles sinensis ASIS016667 I 0.707
ASTEI07799 Anopheles stephensi ASTEI07799 I 0.707
GB43084 Apis mellifera GB43084 I 0.733
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I 0.449
ALUE_0000699101 Ascaris lumbricoides ALUE_0000699101 N 0.468
ASU_00726 Ascaris suum ASU_00726 N 0.468
ACEP19638 Atta cephalotes ACEP19638 I 0.636
BGLB013489 Biomphalaria glabrata BGLB013489 N 0.434
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.741
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.698
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.698
Bm4188 Brugia malayi Bm4188 N 0.656
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.594
CBN07735 Caenorhabditis brenneri CBN07735 N 0.429
CBN31697 Caenorhabditis brenneri CBN31697 N 0.429
CBG11867 Caenorhabditis briggsae CBG11867 N 0.429
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.429
CJA03316 Caenorhabditis japonica CJA03316 N 0.429
CJA30740 Caenorhabditis japonica CJA30740 N 0.429
CRE14258 Caenorhabditis remanei CRE14258 N 0.429
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.691
CLEC001918 Cimex lectularius CLEC001918 I 0.714
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.641
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.648
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.423
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.734
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.532
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.532
KGM_14572 Danaus plexippus KGM_14572 I 0.741
tox4b Danio rerio ENSDARG00000100163 I 0.667
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N 0.481
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N 0.656
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.494
DRE_06603 Drechslerella stenobrocha DRE_06603 I 0.417
GG14588 Drosophila erecta FBgn0106844 N 0.425
CG12104 Drosophila melanogaster FBgn0035238 N 0.420
GL20738 Drosophila persimilis FBgn0158333 N 0.430
GA11397 Drosophila pseudoobscura FBgn0071451 N 0.430
GM14202 Drosophila sechellia FBgn0169128 N 0.420
GD17612 Drosophila simulans FBgn0189162 N 0.420
GK17179 Drosophila willistoni FBgn0219178 N 0.434
GE20948 Drosophila yakuba FBgn0238234 N 0.420
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N 0.656
EDI_340970 Entamoeba dispar EDI_340970 N 0.438
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.535
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N 0.694
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.679
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.717
tox2 Gasterosteus aculeatus ENSGACG00000006914 N 0.694
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.735
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N 0.650
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I 0.658
HCOI00076900 Haemonchus contortus HCOI00076900 N 0.481
HCOI01215700 Haemonchus contortus HCOI01215700 N 0.481
HHAL000823-PA Halyomorpha halys HHAL000823-PA I 0.714
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N 0.498
HMEL005034 Heliconius melpomene HMEL005034 I 0.741
HelroG145107 Helobdella robusta HelroG145107 N 0.657
ISCW015985 Ixodes scapularis ISCW015985 N 0.720
ISCW018867 Ixodes scapularis ISCW018867 I 0.707
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N 0.627
LOAG_18151 Loa loa LOAG_18151 N 0.656
LotgiG109021 Lottia gigantea LotgiG109021 I 0.733
LCUP006200 Lucilia cuprina LCUP006200 N 0.634
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.505
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N 0.640
MESCA003479 Megaselia scalaris MESCA003479 N 0.510
MCINX005468 Melitaea cinxia MCINX005468 I 0.741
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.438
Minc06622 Meloidogyne incognita Minc06622 N 0.438
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I 0.519
fgeneshMC_pg.1_#_1771 Mucor circinelloides fgeneshMC_pg.1_#_1771 I 0.481
fgeneshMC_pg.3_#_1190 Mucor circinelloides fgeneshMC_pg.3_#_1190 I 0.455
MDOA008605 Musca domestica MDOA008605 N 0.624
Myotis_brandtii_DAP3_10031965 Myotis brandtii Myotis_brandtii_DAP3_10031965 N 0.449
NV10488 Nasonia vitripennis NV10488 I 0.735
NECAME_01599 Necator americanus NECAME_01599 N 0.481
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.418
NCU02819 Neurospora crassa NCU02819 D 0.425
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.425
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.425
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.706
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N 0.481
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.638
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.638
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.638
ENSONIG00000000284 Oreochromis niloticus ENSONIG00000000284 N 0.673
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.698
tox2 Oryzias latipes ENSORLG00000004818 N 0.694
tox4b Oryzias latipes ENSORLG00000008779 N 0.673
PTRK_0000294100 Parastrongyloides trichosuri PTRK_0000294100 N 0.440
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.416
PHUM393920 Pediculus humanus PHUM393920 N 0.483
gw1.72.30.1 Phycomyces blakesleeanus gw1.72.30.1 I 0.432
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N 0.673
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N 0.694
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.481
Hmgb1 Rattus norvegicus ENSRNOG00000029813 N 0.445
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.460
RO3G_05222 Rhizopus oryzae RO3G_05222 N 0.506
RO3G_07013 Rhizopus oryzae RO3G_07013 I 0.532
RO3G_07543 Rhizopus oryzae RO3G_07543 I 0.443
RO3G_09728 Rhizopus oryzae RO3G_09728 I 0.419
RO3G_15755 Rhizopus oryzae RO3G_15755 I 0.482
RO3G_16060 Rhizopus oryzae RO3G_16060 I 0.468
RPRC000650 Rhodnius prolixus RPRC000650 I 0.714
nRc.2.0.1.g21669 Romanomermis culicivorax nRc.2.0.1.g21669 N 0.439
nRc.2.0.1.g36724 Romanomermis culicivorax nRc.2.0.1.g36724 N 0.465
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N 0.669
O9G_002262 Rozella allomycis O9G_002262 I 0.444
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.720
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I 0.449
SMU15029818 Schmidtea mediterranea SMU15029818 I 0.622
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.421
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.425
TOX2 Sorex araneus ENSSARG00000001080 N 0.498
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.480
L889_g13125 Steinernema feltiae L889_g13125 N 0.474
L892_g13433 Steinernema scapterisci L892_g13433 I 0.480
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.720
SPAL_0001270100 Strongyloides papillosus SPAL_0001270100 N 0.440
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.416
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.416
SSTP_0001066100 Strongyloides stercoralis SSTP_0001066100 N 0.440
SVE_0367300 Strongyloides venezuelensis SVE_0367300 N 0.440
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.416
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N 0.481
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N 0.694
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N 0.694
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.504
tox4b Takifugu rubripes ENSTRUG00000002594 N 0.673
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.694
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N 0.481
TTHERM_00216040 Tetrahymena thermophila TTHERM_00216040 N 0.547
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.497
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.497
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.484
tox4b Tetraodon nigroviridis ENSTNIG00000003691 N 0.673
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N 0.694
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.415
TCLT_0000844001 Thelazia callipaeda TCLT_0000844001 N 0.541
TCNE_0000652201 Toxocara canis TCNE_0000652201 N 0.474
TC012723 Tribolium castaneum TC012723 I 0.741
D917_02150 Trichinella nativa D917_02150 N 0.655
D917_05048 Trichinella nativa D917_05048 N 0.430
EFV52201 Trichinella spiralis EFV52201 N 0.532
EFV56095 Trichinella spiralis EFV56095 N 0.430
EFV61455 Trichinella spiralis EFV61455 N 0.655
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N 0.683
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I 0.705
D918_03887 Trichuris suis D918_03887 N 0.532
D918_09264 Trichuris suis D918_09264 N 0.683
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N 0.683
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I 0.705
GSTUM_00011974001 Tuber melanosporum GSTUM_00011974001 I 0.429
BN7_5566 Wickerhamomyces ciferrii BN7_5566 I 0.425
WUBG_03914 Wuchereria bancrofti WUBG_03914 N 0.656
tox4.S Xenopus laevis XB-GENE-993810 I 0.667
XP_002936155 Xenopus tropicalis XP_002936155 N 0.698
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.695
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N 0.694
L798_00437 Zootermopsis nevadensis L798_00437 N 0.545