LOC103694516 (Rattus norvegicus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSRNOG00000049646 T329067_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000065631 Sox 9 79
ENSRNOP00000065631 Sox 93 161

Links

Other Sox family TFs
Other Rattus norvegicus TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_07703 Arthroderma benhamiae ARB_07703 I
stuA Aspergillus nidulans CADANIAG00007206 D
ATEG_09634 Aspergillus terreus CADATEAG00005510 I
COCC4DRAFT_44406 Bipolaris maydis COCC4DRAFT_44406 I
COCMIDRAFT_103135 Bipolaris oryzae COCMIDRAFT_103135 I
COCSADRAFT_302496 Bipolaris sorokiniana COCSADRAFT_302496 I
COCVIDRAFT_16107 Bipolaris victoriae COCVIDRAFT_16107 I
COCCADRAFT_26917 Bipolaris zeicola COCCADRAFT_26917 I
COCCADRAFT_73688 Bipolaris zeicola COCCADRAFT_73688 I
HMGB1 Bos taurus ENSBTAG00000014862 N 0.424
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.424
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.421
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.420
CaO19.610 Candida albicans CaO19.610 I
CaO19.8243 Candida albicans CaO19.8243 I
CD36_33560 Candida dubliniensis CD36_33560 I
PGUG_03651 Candida guilliermondii PGUG_03651 I
G210_4810 Candida maltosa G210_4810 I
CORT_0G01760 Candida orthopsilosis CORT_0G01760 I
CPAG_00178 Candida parapsilosis CPAG_00178 I
A1O1_08398 Capronia coronata A1O1_08398 I
A1O3_03409 Capronia epimyces A1O3_03409 I
PV04_03682 Capronia semiimmersa PV04_03682 I
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.424
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.430
Z519_00159 Cladophialophora bantiana Z519_00159 I
G647_04898 Cladophialophora carrionii G647_04898 I
PV07_06558 Cladophialophora immunda PV07_06558 I
A1O5_00159 Cladophialophora psammophila A1O5_00159 I
A1O7_03484 Cladophialophora yegresii A1O7_03484 I
csin112095 Clonorchis sinensis csin112095 N 0.419
estExt_fgenesh1_pg.C_220129 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_220129 I
W97_03035 Coniosporium apollinis W97_03035 I
HMPREF1541_04332 Cyphellophora europaea HMPREF1541_04332 I
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.420
DEHA2E10978g Debaryomyces hansenii DEHA2E10978g I
ECANG7_07075 Echinococcus canadensis ECANG7_07075 N 0.447
EmuJ_000941400 Echinococcus multilocularis EmuJ_000941400 N 0.447
EPUS_07300 Endocarpon pusillum EPUS_07300 I
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.424
EV44_g0662 Erysiphe necator EV44_g0662 I
A1O9_03203 Exophiala aquamarina A1O9_03203 I
HMPREF1120_05541 Exophiala dermatitidis HMPREF1120_05541 I
PV10_05546 Exophiala mesophila PV10_05546 I
PV06_02692 Exophiala oligosperma PV06_02692 I
PV11_01247 Exophiala sideris PV11_01247 I
PV08_11235 Exophiala spinifera PV08_11235 I
PV05_06033 Exophiala xenobiotica PV05_06033 I
Z517_10243 Fonsecaea pedrosoi Z517_10243 I
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N 0.417
GGTG_14065 Gaeumannomyces graminis GGTG_14065 I
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.439
CMQ_1733 Grosmannia clavigera CMQ_1733 I
TTAC_0000939701 Hydatigera taeniaeformis TTAC_0000939701 N 0.428
HmN_000761000 Hymenolepis microstoma HmN_000761000 N 0.452
HNAJ_0000227501 Hymenolepis nana HNAJ_0000227501 N 0.433
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.424
LEMA_P011910.1 Leptosphaeria maculans LEMA_P011910.1 I
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.424
MPH_04924 Macrophomina phaseolina MPH_04924 I
MGG_00692 Magnaporthe oryzae MGG_00692 I
MAPG_07556 Magnaporthe poae MAPG_07556 I
MBM_08068 Marssonina brunnea MBM_08068 I
MBM_09122 Marssonina brunnea MBM_09122 I
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N 0.447
PGUG_03651 Meyerozyma guilliermondii PGUG_03651 I
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.424
MGYG_00853 Microsporum gypseum MGYG_00853 I
GNLVRS01_PISO0E14370g Millerozyma farinosa GNLVRS01_PISO0E14370g I
GNLVRS01_PISO0F15757g Millerozyma farinosa GNLVRS01_PISO0F15757g I
ENSMODG00000004606 Monodelphis domestica ENSMODG00000004606 N 0.425
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.424
MYCTH_93313 Myceliophthora thermophila MYCTH_93313 I
estExt_Genewise1.C_120474 Mycosphaerella fijiensis estExt_Genewise1.C_120474 I
fgenesh1_pg.C_chr_6000228 Mycosphaerella graminicola fgenesh1_pg.C_chr_6000228 I
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.418
UCRNP2_9205 Neofusicoccum parvum UCRNP2_9205 I
OIDMADRAFT_111132 Oidiodendron maius OIDMADRAFT_111132 I
F503_05005 Ophiostoma piceae uamh F503_05005 I
T265_10726 Opisthorchis viverrini T265_10726 N 0.435
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N 0.416
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.424
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.418
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.418
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.424
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.427
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.418
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.449
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.418
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.418
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.424
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.424
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.418
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.424
PABG_04648 Paracoccidioides brasiliensis PABG_04648 I
PAAG_08500 Paracoccidioides sp lutzii PAAG_08500 I
SNOG_14941 Phaeosphaeria nodorum SNOG_14941 I
estExt_fgenesh1_pg.C_chr_3.10654 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10654 I
PNEG_01921 Pneumocystis murina PNEG_01921 I
PODANS_2_890 Podospora anserina PODANS_2_890 I
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.415
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.417
MYCFIDRAFT_96804 Pseudocercospora fijiensis MYCFIDRAFT_96804 I
PTT_19958 Pyrenophora teres PTT_19958 I
PTRG_01883 Pyrenophora triticirepentis PTRG_01883 I
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.424
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.424
AC127605.1 Rattus norvegicus ENSRNOG00000033156 N 0.543
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.424
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.424
LOC108349258 Rattus norvegicus ENSRNOG00000047496 N 0.704
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.424
AABR07030543.1 Rattus norvegicus ENSRNOG00000051634 N 0.675
LOC103694517 Rattus norvegicus ENSRNOG00000052269 N 0.737
AABR07041586.2 Rattus norvegicus ENSRNOG00000052769 N 0.517
RGD1561558 Rattus norvegicus ENSRNOG00000053609 N 0.741
RGD1566225 Rattus norvegicus ENSRNOG00000055742 N 0.716
AABR07045786.1 Rattus norvegicus ENSRNOG00000055923 N 0.675
AABR07040430.1 Rattus norvegicus ENSRNOG00000056486 N 0.466
LOC681067 Rattus norvegicus ENSRNOG00000057013 N 0.728
AABR07040480.1 Rattus norvegicus ENSRNOG00000057407 N 0.485
LOC691030 Rattus norvegicus ENSRNOG00000057926 N 0.714
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.424
RGD1560585 Rattus norvegicus ENSRNOG00000060534 N 0.722
Z518_01430 Rhinocladiella mackenziei Z518_01430 I
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.426
PICST_67427 Scheffersomyces stipitis PICST_67427 I
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.428
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.422
A_00070 Schistosoma haematobium A_00070 N 0.422
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.442
Smp_100090 Schistosoma mansoni Smp_100090 N 0.419
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.422
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.422
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.419
SBOR_2212 Sclerotinia borealis SBOR_2212 I
SETTUDRAFT_91357 Setosphaeria turcica SETTUDRAFT_91357 I
SPAPADRAFT_59209 Spathaspora passalidarum SPAPADRAFT_59209 I
SEPMUDRAFT_149389 Sphaerulina musiva SEPMUDRAFT_149389 I
SPBR_02388 Sporothrix brasiliensis SPBR_02388 I
HMPREF1624_02851 Sporothrix schenckii HMPREF1624_02851 I
SNOG_14941 Stagonospora nodorum SNOG_14941 I
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.425
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.418
TASK_0000795701 Taenia asiatica TASK_0000795701 N 0.447
TsM_000746700 Taenia solium TsM_000746700 N 0.447
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.423
THITE_129457 Thielavia terrestris THITE_129457 I
UCRPA7_4586 Togninia minima UCRPA7_4586 I
VHEMI10191 Torrubiella hemipterigena VHEMI10191 I
TEQG_02678 Trichophyton equinum TEQG_02678 I
H102_08122 Trichophyton rubrum H102_08122 I
H105_08150 Trichophyton soudanense H105_08150 I
TESG_02237 Trichophyton tonsurans TESG_02237 I
TRV_07259 Trichophyton verrucosum TRV_07259 I
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N 0.420
UREG_00857 Uncinocarpus reesii UREG_00857 I
UHOR_02465 Ustilago hordei UHOR_02465 I
PV09_05716 Verruconis gallopava PV09_05716 I
VDBG_00362 Verticillium alfalfae VDBG_00362 I
AAC59859 Xenopus laevis AAC59859 N 0.449
AAH44009 Xenopus laevis AAH44009 N 0.418
AAH73449 Xenopus laevis AAH73449 N 0.449
YALI0_B19602g Yarrowia lipolytica YALI0_B19602g I