GB43084 (Apis mellifera)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GB43084 T329994_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.425 0.377
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB43084-PA Sox 322 390

Links

Other Sox family TFs
Other Apis mellifera TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.648
ACYPI001480 Acyrthosiphon pisum ACYPI001480 N 0.422
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.701
ENSAPLG00000003986 Anas platyrhynchos ENSAPLG00000003986 N 0.445
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N 0.473
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N 0.473
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N 0.473
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N 0.473
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N 0.473
ASIM_0001958001 Anisakis simplex ASIM_0001958001 N 0.591
AALB006415 Anopheles albimanus AALB006415 I 0.699
AARA010616 Anopheles arabiensis AARA010616 I 0.699
AATE016215 Anopheles atroparvus AATE016215 I 0.699
ACUA004409 Anopheles culicifacies ACUA004409 I 0.699
ADAC003252 Anopheles darlingi ADAC003252 I 0.699
AEPI010254 Anopheles epiroticus AEPI010254 N 0.532
AFAF011136 Anopheles farauti AFAF011136 I 0.699
AFUN005717 Anopheles funestus AFUN005717 N 0.530
AGAP000281 Anopheles gambiae AGAP000281 I 0.699
AMAM014030 Anopheles maculatus AMAM014030 N 0.532
AMEC012857 Anopheles melas AMEC012857 I 0.699
AMEM006878 Anopheles merus AMEM006878 I 0.699
AMIN005634 Anopheles minimus AMIN005634 N 0.538
ASIS016667 Anopheles sinensis ASIS016667 I 0.699
ASTEI07799 Anopheles stephensi ASTEI07799 I 0.699
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I 0.458
ALUE_0000699101 Ascaris lumbricoides ALUE_0000699101 N 0.468
ASU_00726 Ascaris suum ASU_00726 N 0.468
ACEP19638 Atta cephalotes ACEP19638 I 0.627
BGLB013489 Biomphalaria glabrata BGLB013489 N 0.434
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.733
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.690
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.690
Bm4188 Brugia malayi Bm4188 N 0.648
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.585
CBN07735 Caenorhabditis brenneri CBN07735 N 0.421
CBN31697 Caenorhabditis brenneri CBN31697 N 0.421
CBG11867 Caenorhabditis briggsae CBG11867 N 0.421
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.421
CJA03316 Caenorhabditis japonica CJA03316 N 0.421
CJA30740 Caenorhabditis japonica CJA30740 N 0.421
CRE14258 Caenorhabditis remanei CRE14258 N 0.421
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.683
CLEC001918 Cimex lectularius CLEC001918 I 0.706
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.633
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.639
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.423
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.726
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.532
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.532
KGM_14572 Danaus plexippus KGM_14572 I 0.733
tox4b Danio rerio ENSDARG00000100163 I 0.659
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.733
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N 0.473
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N 0.648
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.485
DRE_06603 Drechslerella stenobrocha DRE_06603 I 0.425
GG14588 Drosophila erecta FBgn0106844 N 0.425
CG12104 Drosophila melanogaster FBgn0035238 N 0.420
GL20738 Drosophila persimilis FBgn0158333 N 0.430
GA11397 Drosophila pseudoobscura FBgn0071451 N 0.430
GM14202 Drosophila sechellia FBgn0169128 N 0.420
GD17612 Drosophila simulans FBgn0189162 N 0.420
GK17179 Drosophila willistoni FBgn0219178 N 0.434
GE20948 Drosophila yakuba FBgn0238234 N 0.420
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N 0.648
EDI_340970 Entamoeba dispar EDI_340970 N 0.430
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.535
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N 0.686
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.671
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.717
tox2 Gasterosteus aculeatus ENSGACG00000006914 N 0.686
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.726
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N 0.642
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I 0.650
HCOI00076900 Haemonchus contortus HCOI00076900 N 0.473
HCOI01215700 Haemonchus contortus HCOI01215700 N 0.473
HHAL000823-PA Halyomorpha halys HHAL000823-PA I 0.706
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N 0.498
HMEL005034 Heliconius melpomene HMEL005034 I 0.733
HelroG145107 Helobdella robusta HelroG145107 N 0.649
ISCW015985 Ixodes scapularis ISCW015985 N 0.711
ISCW018867 Ixodes scapularis ISCW018867 I 0.699
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N 0.619
LOAG_18151 Loa loa LOAG_18151 N 0.648
LotgiG109021 Lottia gigantea LotgiG109021 I 0.724
LCUP006200 Lucilia cuprina LCUP006200 N 0.626
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.505
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N 0.631
MESCA003479 Megaselia scalaris MESCA003479 N 0.501
MCINX005468 Melitaea cinxia MCINX005468 I 0.733
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.430
Minc06622 Meloidogyne incognita Minc06622 N 0.430
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I 0.519
fgeneshMC_pg.1_#_1771 Mucor circinelloides fgeneshMC_pg.1_#_1771 I 0.481
fgeneshMC_pg.3_#_1190 Mucor circinelloides fgeneshMC_pg.3_#_1190 I 0.447
MDOA008605 Musca domestica MDOA008605 N 0.616
Myotis_brandtii_DAP3_10031965 Myotis brandtii Myotis_brandtii_DAP3_10031965 N 0.449
NV10488 Nasonia vitripennis NV10488 I 0.726
NECAME_01599 Necator americanus NECAME_01599 N 0.473
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.427
NCU02819 Neurospora crassa NCU02819 D 0.425
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.425
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.425
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.697
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N 0.473
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.629
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.629
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.629
ENSONIG00000000284 Oreochromis niloticus ENSONIG00000000284 N 0.665
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.690
tox2 Oryzias latipes ENSORLG00000004818 N 0.686
tox4b Oryzias latipes ENSORLG00000008779 N 0.665
PTRK_0000294100 Parastrongyloides trichosuri PTRK_0000294100 N 0.432
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.416
PHUM393920 Pediculus humanus PHUM393920 N 0.483
gw1.72.30.1 Phycomyces blakesleeanus gw1.72.30.1 I 0.432
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N 0.665
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N 0.686
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.473
Hmgb1 Rattus norvegicus ENSRNOG00000029813 N 0.445
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.469
RO3G_05222 Rhizopus oryzae RO3G_05222 N 0.506
RO3G_07013 Rhizopus oryzae RO3G_07013 I 0.532
RO3G_07543 Rhizopus oryzae RO3G_07543 I 0.443
RO3G_09728 Rhizopus oryzae RO3G_09728 I 0.419
RO3G_15755 Rhizopus oryzae RO3G_15755 I 0.474
RO3G_16060 Rhizopus oryzae RO3G_16060 I 0.460
RPRC000650 Rhodnius prolixus RPRC000650 I 0.706
nRc.2.0.1.g21669 Romanomermis culicivorax nRc.2.0.1.g21669 N 0.439
nRc.2.0.1.g36724 Romanomermis culicivorax nRc.2.0.1.g36724 N 0.465
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N 0.660
O9G_002262 Rozella allomycis O9G_002262 I 0.444
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.711
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I 0.449
SMU15029818 Schmidtea mediterranea SMU15029818 I 0.614
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.421
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.425
TOX2 Sorex araneus ENSSARG00000001080 N 0.498
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.472
L889_g13125 Steinernema feltiae L889_g13125 N 0.466
L892_g13433 Steinernema scapterisci L892_g13433 I 0.472
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.712
SPAL_0001270100 Strongyloides papillosus SPAL_0001270100 N 0.432
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.416
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.416
SSTP_0001066100 Strongyloides stercoralis SSTP_0001066100 N 0.432
SVE_0367300 Strongyloides venezuelensis SVE_0367300 N 0.432
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.416
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N 0.473
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N 0.686
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N 0.686
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.504
tox4b Takifugu rubripes ENSTRUG00000002594 N 0.665
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.686
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N 0.473
TTHERM_00216040 Tetrahymena thermophila TTHERM_00216040 N 0.547
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.488
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.488
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.476
tox4b Tetraodon nigroviridis ENSTNIG00000003691 N 0.665
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N 0.686
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.415
TCLT_0000844001 Thelazia callipaeda TCLT_0000844001 N 0.533
TCNE_0000652201 Toxocara canis TCNE_0000652201 N 0.474
TC012723 Tribolium castaneum TC012723 I 0.733
D917_02150 Trichinella nativa D917_02150 N 0.647
D917_05048 Trichinella nativa D917_05048 N 0.422
EFV52201 Trichinella spiralis EFV52201 N 0.532
EFV56095 Trichinella spiralis EFV56095 N 0.422
EFV61455 Trichinella spiralis EFV61455 N 0.647
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N 0.675
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I 0.697
D918_03887 Trichuris suis D918_03887 N 0.532
D918_09264 Trichuris suis D918_09264 N 0.675
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N 0.675
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I 0.697
GSTUM_00011974001 Tuber melanosporum GSTUM_00011974001 I 0.429
BN7_5566 Wickerhamomyces ciferrii BN7_5566 I 0.425
WUBG_03914 Wuchereria bancrofti WUBG_03914 N 0.648
tox4.S Xenopus laevis XB-GENE-993810 I 0.659
XP_002936155 Xenopus tropicalis XP_002936155 N 0.690
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.687
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N 0.686
L798_00437 Zootermopsis nevadensis L798_00437 N 0.545