CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCHCODRAFT_105718
(
Schizophyllum commune
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SCHCODRAFT_105718
T332442_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ00308
Sox
47
83
YRHPNAFILFRQSFLKGSKATWVEPKGKDIHKVIGEY
EFJ00308
Sox
96
129
SAQHWKALPEEERERFRAQAAQNKQTAQLPNPEK
Links
Other
Sox
family TFs
Other
Schizophyllum commune
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIS002444
Anopheles sinensis
ASIS002444
N
0.445
BGIBMGA006156
Bombyx mori
BGIBMGA006156
N
0.435
Bra012832
Brassica rapa
Bra012832
N
0.433
Ca_10726
Cicer arietinum
Ca_10726
N
0.430
Cla010647
Citrullus lanatus
Cla010647
N
0.433
UCREL1_5722
Eutypa lata
UCREL1_5722
N
0.422
GLYMA16G22060
Glycine max
GLYMA16G22060
I
0.430
HelroG178674
Helobdella robusta
HelroG178674
N
0.454
JAAARDRAFT_460099
Jaapia argillacea
JAAARDRAFT_460099
N
0.454
Lus10013219.g
Linum usitatissimum
Lus10013219.g
N
0.430
Lus10016695.g
Linum usitatissimum
Lus10016695.g
N
0.430
Lus10027787.g
Linum usitatissimum
Lus10027787.g
N
0.415
Lus10035991.g
Linum usitatissimum
Lus10035991.g
N
0.430
LCUP017801
Lucilia cuprina
LCUP017801
N
0.436
MDP0000699531
Malus domestica
MDP0000699531
N
0.493
OBART09G18880
Oryza barthii
OBART09G18880
N
0.421
OGLUM09G19410
Oryza glumaepatula
OGLUM09G19410
N
0.421
BGIOSGA031227
Oryza indica
BGIOSGA031227
N
0.421
OLONG_009629
Oryza longistaminata
OLONG_009629
N
0.433
OPUNC09G17310
Oryza punctata
OPUNC09G17310
N
0.421
fgenesh1_pg.C_scaffold_10000369
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_10000369
N
0.421
SCHCODRAFT_110960
Schizophyllum commune
SCHCODRAFT_110960
N
0.450
SINV25043
Solenopsis invicta
SINV25043
N
0.450
TSTA_110260
Talaromyces stipitatus
TSTA_110260
N
0.452
M407DRAFT_45069
Tulasnella calospora
M407DRAFT_45069
N
0.457