Cla010647 (Citrullus lanatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Cla010647 T333642_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla010647 Sox 25 55
Cla010647 Sox 52 79

Links

Other Sox family TFs
Other Citrullus lanatus TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_603934.1 Arabidopsis lyrata scaffold_603934.1 N 0.000
Bo9g006410 Brassica oleracea Bo9g006410 N 0.000
BTMF_0000474601 Brugia timori BTMF_0000474601 N 0.000
ENSDNOG00000038094 Dasypus novemcinctus ENSDNOG00000038094 N 0.000
DICVIV_12877 Dictyocaulus viviparus DICVIV_12877 N 0.000
D915_07707 Fasciola hepatica D915_07707 N 0.000
gene14635-v1.0-hybrid Fragaria vesca gene14635-v1.0-hybrid N 0.000
GLYMA08G38930 Glycine max GLYMA08G38930 N 0.000
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.000
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.000
LjSGA_012738.1 Lotus japonicus LjSGA_012738.1 N 0.000
cassava31027.valid.m1 Manihot esculenta cassava31027.valid.m1 N 0.000
GSMUA_Achr8G27210_001 Musa acuminata GSMUA_Achr8G27210_001 N 0.000
GSMUA_Achr9G06610_001 Musa acuminata GSMUA_Achr9G06610_001 N 0.000
OESDEN_18963 Oesophagostomum dentatum OESDEN_18963 N 0.000
OBART05G11630 Oryza barthii OBART05G11630 N 0.000
OBART01G26120 Oryza barthii OBART01G26120 N 0.000
OB01G35260 Oryza brachyantha OB01G35260 N 0.000
BGIOSGA019617 Oryza indica BGIOSGA019617 N 0.000
OLONG_014924 Oryza longistaminata OLONG_014924 N 0.000
ONIVA05G12010 Oryza nivara ONIVA05G12010 N 0.000
POPTR_0004s04840 Populus trichocarpa POPTR_0004s04840 N 0.000
Pm012761 Prunus mume Pm012761 N 0.000
SapurV1A.0042s0570 Salix purpurea SapurV1A.0042s0570 I 0.000
PGSC0003DMG400004714 Solanum tuberosum PGSC0003DMG400004714 I 0.000
TCM_008214 Theobroma cacao TCM_008214 I 0.000