nLs.2.1.2.g00300 (Litomosoides sigmodontis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 nLs.2.1.2.g00300 T336702_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t00300-RA Sox 10 79
nLs.2.1.2.t00300-RA Sox 97 149

Links

Other Sox family TFs
Other Litomosoides sigmodontis TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.640
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.648
ANCCEY_10333 Ancylostoma ceylanicum ANCCEY_10333 N 0.598
ACAC_0001052301 Angiostrongylus cantonensis ACAC_0001052301 N 0.534
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.616
ASIM_0000048401 Anisakis simplex ASIM_0000048401 N 0.602
GB47828 Apis mellifera GB47828 N 0.441
ASU_03902 Ascaris suum ASU_03902 N 0.637
Bm4180 Brugia malayi Bm4180 N 0.640
BXY_1555400 Bursaphelenchus xylophilus BXY_1555400 N 0.518
CBN17977 Caenorhabditis brenneri CBN17977 N 0.584
CBG17468 Caenorhabditis briggsae CBG17468 N 0.586
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.584
CJA42049 Caenorhabditis japonica CJA42049 N 0.553
CJA09678 Caenorhabditis japonica CJA09678 N 0.584
CRE02943 Caenorhabditis remanei CRE02943 N 0.538
CapteG158220 Capitella teleta CapteG158220 N 0.442
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.444
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.439
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.432
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.640
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.615
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.437
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.640
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.637
D915_00818 Fasciola hepatica D915_00818 N 0.437
GPUH_0001544201 Gongylonema pulchrum GPUH_0001544201 N 0.526
ENSGGOG00000023427 Gorilla gorilla ENSGGOG00000023427 N 0.426
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.616
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.617
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.437
ISCW017350 Ixodes scapularis ISCW017350 N 0.419
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.420
LOAG_04936 Loa loa LOAG_04936 N 0.640
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N 0.441
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.589
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.589
MhA1_Contig113.frz3.gene9 Meloidogyne hapla MhA1_Contig113.frz3.gene9 N 0.587
Minc08988 Meloidogyne incognita Minc08988 N 0.605
Minc03268 Meloidogyne incognita Minc03268 N 0.605
Minc01077 Meloidogyne incognita Minc01077 N 0.457
NECAME_09126 Necator americanus NECAME_09126 N 0.616
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.616
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.640
ENSOGAG00000010941 Otolemur garnettii ENSOGAG00000010941 N 0.456
ENSOARG00000019147 Ovis aries ENSOARG00000019147 N 0.420
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.637
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.603
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.615
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.615
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N 0.606
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.557
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.427
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.573
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.628
L889_g13533 Steinernema feltiae L889_g13533 N 0.627
L893_g5947 Steinernema glaseri L893_g5947 N 0.632
L892_g17551 Steinernema scapterisci L892_g17551 N 0.632
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.603
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.603
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.603
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.637
ENSTSYG00000012587 Tarsius syrichta ENSTSYG00000012587 N 0.456
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.616
TELCIR_06008 Teladorsagia circumcincta TELCIR_06008 N 0.483
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.417
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.637
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.637
D917_08189 Trichinella nativa D917_08189 N 0.573
D917_01254 Trichinella nativa D917_01254 N 0.538
EFV57410 Trichinella spiralis EFV57410 N 0.538
EFV53345 Trichinella spiralis EFV53345 N 0.623
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.585
D918_07195 Trichuris suis D918_07195 N 0.601
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.601
WUBG_12099 Wuchereria bancrofti WUBG_12099 N 0.672