CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CADANGAG00001240
(
Aspergillus niger
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CADANGAG00001240
T361450_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_10120
M01345_2.00
Aspergillus nidulans
CGGBWWHNNN
NNNDWWVCCG
PBM
Lambert et al.(2019)
pEX0390
0.633
0.895
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANGAP00001199
Zinc cluster
31
74
RACLHCRQRKSKCDLDSSGSPGVPPCQRCIRDNRECVLGSSNRG
Links
Other
Zinc cluster
family TFs
Other
Aspergillus niger
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_11193
Aegilops tauschii
F775_11193
N
0.000
F775_14972
Aegilops tauschii
F775_14972
N
0.000
Aquca_004_00109
Aquilegia coerulea
Aquca_004_00109
N
0.000
Aquca_006_00227
Aquilegia coerulea
Aquca_006_00227
N
0.000
Aquca_040_00077
Aquilegia coerulea
Aquca_040_00077
N
0.000
WIP6
Arabidopsis thaliana
AT1G13290
N
0.000
Bostr.13671s0117
Boechera stricta
Bostr.13671s0117
N
0.000
BRADI2G23870
Brachypodium distachyon
BRADI2G23870
N
0.000
BRADI2G55540
Brachypodium distachyon
BRADI2G55540
N
0.000
BRADI3G39820
Brachypodium distachyon
BRADI3G39820
N
0.000
BRADI4G33557
Brachypodium distachyon
BRADI4G33557
N
0.000
Bo5g015200
Brassica oleracea
Bo5g015200
N
0.000
Bo5g081360
Brassica oleracea
Bo5g081360
N
0.000
Bra019822
Brassica rapa
Bra019822
N
0.000
PK05257.1
Cannabis sativa
PK05257.1
N
0.000
Cagra.3501s0170
Capsella grandiflora
Cagra.3501s0170
N
0.000
Carubv10012013m.g
Capsella rubella
Carubv10012013m.g
N
0.000
evm.TU.contig_31438
Carica papaya
evm.TU.contig_31438
N
0.000
evm.TU.contig_35924
Carica papaya
evm.TU.contig_35924
N
0.000
Ca_07051
Cicer arietinum
Ca_07051
N
0.000
Ca_16482
Cicer arietinum
Ca_16482
N
0.000
Cla000184
Citrullus lanatus
Cla000184
N
0.000
Ciclev10028757m.g
Citrus clementina
Ciclev10028757m.g
N
0.000
orange1.1g039549m.g
Citrus sinensis
orange1.1g039549m.g
N
0.000
Cucsa.199850
Cucumis sativus
Cucsa.199850
N
0.000
Eucgr.B03870
Eucalyptus grandis
Eucgr.B03870
N
0.000
Eucgr.J01266
Eucalyptus grandis
Eucgr.J01266
N
0.000
Thhalv10009489m.g
Eutrema salsugineum
Thhalv10009489m.g
N
0.000
gene22042-v1.0-hybrid
Fragaria vesca
gene22042-v1.0-hybrid
N
0.000
GLYMA11G19060
Glycine max
GLYMA11G19060
N
0.000
GLYMA12G09400
Glycine max
GLYMA12G09400
N
0.000
GLYMA12G30930
Glycine max
GLYMA12G30930
N
0.000
GLYMA13G39370
Glycine max
GLYMA13G39370
N
0.000
Gorai.001G121700
Gossypium raimondii
Gorai.001G121700
N
0.000
Gorai.006G111400
Gossypium raimondii
Gorai.006G111400
N
0.000
MLOC_2787
Hordeum vulgare
MLOC_2787
N
0.000
LPERR01G32600
Leersia perrieri
LPERR01G32600
N
0.000
LPERR08G16620
Leersia perrieri
LPERR08G16620
N
0.000
LPERR09G10700
Leersia perrieri
LPERR09G10700
N
0.000
Lus10004887.g
Linum usitatissimum
Lus10004887.g
N
0.000
Lus10020597.g
Linum usitatissimum
Lus10020597.g
N
0.000
Lus10029525.g
Linum usitatissimum
Lus10029525.g
N
0.000
Lus10039613.g
Linum usitatissimum
Lus10039613.g
N
0.000
chr3.CM1144.10.nc
Lotus japonicus
chr3.CM1144.10.nc
N
0.000
MDP0000131949
Malus domestica
MDP0000131949
N
0.000
MDP0000300013
Malus domestica
MDP0000300013
N
0.000
cassava13451.valid.m1
Manihot esculenta
cassava13451.valid.m1
N
0.000
cassava16214.m1
Manihot esculenta
cassava16214.m1
N
0.000
GSMUA_Achr11G18950_001
Musa acuminata
GSMUA_Achr11G18950_001
N
0.000
GSMUA_Achr4G01560_001
Musa acuminata
GSMUA_Achr4G01560_001
N
0.000
GSMUA_Achr5G26210_001
Musa acuminata
GSMUA_Achr5G26210_001
N
0.000
OBART01G37960
Oryza barthii
OBART01G37960
N
0.000
OBART02G07320
Oryza barthii
OBART02G07320
N
0.000
OBART08G19670
Oryza barthii
OBART08G19670
N
0.000
OB05G26090
Oryza brachyantha
OB05G26090
N
0.000
OB08G26650
Oryza brachyantha
OB08G26650
N
0.000
ORGLA01G0317700
Oryza glaberrima
ORGLA01G0317700
N
0.000
ORGLA02G0068500
Oryza glaberrima
ORGLA02G0068500
N
0.000
ORGLA08G0173000
Oryza glaberrima
ORGLA08G0173000
N
0.000
ORGLA09G0111700
Oryza glaberrima
ORGLA09G0111700
N
0.000
OGLUM01G42130
Oryza glumaepatula
OGLUM01G42130
N
0.000
OGLUM05G19360
Oryza glumaepatula
OGLUM05G19360
N
0.000
OGLUM08G20830
Oryza glumaepatula
OGLUM08G20830
N
0.000
OGLUM09G15150
Oryza glumaepatula
OGLUM09G15150
N
0.000
BGIOSGA000452
Oryza indica
BGIOSGA000452
N
0.000
BGIOSGA031001
Oryza indica
BGIOSGA031001
N
0.000
OMERI01G34920
Oryza meridionalis
OMERI01G34920
N
0.000
OMERI08G16450
Oryza meridionalis
OMERI08G16450
N
0.000
OMERI09G11270
Oryza meridionalis
OMERI09G11270
N
0.000
ONIVA04G25710
Oryza nivara
ONIVA04G25710
N
0.000
ONIVA08G21960
Oryza nivara
ONIVA08G21960
N
0.000
ONIVA09G15100
Oryza nivara
ONIVA09G15100
N
0.000
OPUNC01G36780
Oryza punctata
OPUNC01G36780
N
0.000
OPUNC08G17810
Oryza punctata
OPUNC08G17810
N
0.000
OPUNC09G12930
Oryza punctata
OPUNC09G12930
N
0.000
ORUFI01G41290
Oryza rufipogon
ORUFI01G41290
N
0.000
ORUFI09G15680
Oryza rufipogon
ORUFI09G15680
N
0.000
OS01G0859100
Oryza sativa
OS01G0859100
N
0.000
OS08G0504000
Oryza sativa
OS08G0504000
N
0.000
OS09G0485600
Oryza sativa
OS09G0485600
N
0.000
Pavir.Ba01731
Panicum virgatum
Pavir.Ba01731
N
0.000
Pavir.Fa00506
Panicum virgatum
Pavir.Fa00506
N
0.000
Pavir.Fb01879
Panicum virgatum
Pavir.Fb01879
N
0.000
Pavir.J11927
Panicum virgatum
Pavir.J11927
N
0.000
POPTR_0001s05630
Populus trichocarpa
POPTR_0001s05630
N
0.000
POPTR_0004s19460
Populus trichocarpa
POPTR_0004s19460
N
0.000
POPTR_0009s14590
Populus trichocarpa
POPTR_0009s14590
N
0.000
Pm001374
Prunus mume
Pm001374
N
0.000
PRUPE_ppa023619mg
Prunus persica
PRUPE_ppa023619mg
N
0.000
30055.m001542
Ricinus communis
30055.m001542
N
0.000
SapurV1A.0080s0360
Salix purpurea
SapurV1A.0080s0360
N
0.000
SapurV1A.0219s0040
Salix purpurea
SapurV1A.0219s0040
N
0.000
SapurV1A.0445s0120
Salix purpurea
SapurV1A.0445s0120
N
0.000
SapurV1A.0445s0140
Salix purpurea
SapurV1A.0445s0140
N
0.000
Si013819m.g
Setaria italica
Si013819m.g
N
0.000
Si022296m.g
Setaria italica
Si022296m.g
N
0.000
Si029897m.g
Setaria italica
Si029897m.g
N
0.000
Solyc01g087050.2
Solanum lycopersicum
Solyc01g087050.2
N
0.000
PGSC0003DMG400006808
Solanum tuberosum
PGSC0003DMG400006808
N
0.000
PGSC0003DMG400007112
Solanum tuberosum
PGSC0003DMG400007112
N
0.000
Sb02g028220
Sorghum bicolor
Sb02g028220
N
0.000
Sb07g028010
Sorghum bicolor
Sb07g028010
N
0.000
Sb09g021850
Sorghum bicolor
Sb09g021850
N
0.000
TCM_041441
Theobroma cacao
TCM_041441
N
0.000
Traes_5BL_6888AE9CB
Triticum aestivum
Traes_5BL_6888AE9CB
N
0.000
Traes_5DL_51643AC9F
Triticum aestivum
Traes_5DL_51643AC9F
N
0.000
Traes_7AS_8054DC45D
Triticum aestivum
Traes_7AS_8054DC45D
N
0.000
TRIUR3_30490
Triticum urartu
TRIUR3_30490
N
0.000
WIP3
Vitis vinifera
VIT_06s0080g00270
N
0.000
GRMZM2G000836
Zea mays
GRMZM2G000836
N
0.000
GRMZM2G071101
Zea mays
GRMZM2G071101
N
0.000
GRMZM2G084014
Zea mays
GRMZM2G084014
N
0.000
GRMZM2G445684
Zea mays
GRMZM2G445684
N
0.000