Lus10039613.g (Linum usitatissimum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Lus10039613.g T143158_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10039613 C2H2 ZF 233 254
Lus10039613 C2H2 ZF 254 282

Links

Other C2H2 ZF family TFs
Other Linum usitatissimum TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.827
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.827
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.827
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.827
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.818
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.818
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.818
TCM_005892 Theobroma cacao TCM_005892 N 0.818
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.818
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.811
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.811
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.811
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.811
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.811
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.811
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.811
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.811
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.811
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.811
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.811
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.811
TCM_041441 Theobroma cacao TCM_041441 N 0.811
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.811
Pm001374 Prunus mume Pm001374 N 0.811
30055.m001542 Ricinus communis 30055.m001542 N 0.811
30061.m000294 Ricinus communis 30061.m000294 N 0.811
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.811
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.811
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.811
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.811
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.811
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.811
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.811
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.811
MDP0000131949 Malus domestica MDP0000131949 N 0.811
MDP0000300013 Malus domestica MDP0000300013 N 0.811
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.811
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.811
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.808
Ca_16482 Cicer arietinum Ca_16482 N 0.806
MDP0000144266 Malus domestica MDP0000144266 N 0.806
MDP0000142494 Malus domestica MDP0000142494 N 0.805
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.805
29908.m006047 Ricinus communis 29908.m006047 N 0.804
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.804
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.802
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.802
TCM_034881 Theobroma cacao TCM_034881 N 0.798
TT1 Vitis vinifera VIT_18s0001g05860 N 0.798
Cla000184 Citrullus lanatus Cla000184 N 0.798
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.798
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.798
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.798
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.798
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.798
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.797
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.797
MDP0000573922 Malus domestica MDP0000573922 N 0.796
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.794
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.794
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.794
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.793
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.793
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.793
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.793
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.791
30169.m006417 Ricinus communis 30169.m006417 N 0.791
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.791
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.788
WIP2 Arabidopsis thaliana AT3G57670 N 0.788
Bo4g111000 Brassica oleracea Bo4g111000 N 0.788
Bo6g073120 Brassica oleracea Bo6g073120 N 0.788
Bo8g092070 Brassica oleracea Bo8g092070 N 0.788
Bra003295 Brassica rapa Bra003295 N 0.788
Bra014612 Brassica rapa Bra014612 N 0.788
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.788
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.788
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.788
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.788
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.788
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.788
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.788
TCM_024788 Theobroma cacao TCM_024788 N 0.788
NTT Vitis vinifera VIT_08s0007g08070 N 0.788
Ca_07269 Cicer arietinum Ca_07269 N 0.788
Cla008187 Citrullus lanatus Cla008187 N 0.788
Cla015481 Citrullus lanatus Cla015481 N 0.788
Pm025853 Prunus mume Pm025853 N 0.788
27810.m000651 Ricinus communis 27810.m000651 N 0.788
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.788
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.788
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.788
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.788
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.788
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.788
mgf022319m Mimulus guttatus mgf022319m N 0.788
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.788
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.788
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.788
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.788
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.788
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.788
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.788
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.788
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.788
MDP0000601705 Malus domestica MDP0000601705 N 0.788
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.788
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.788
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.788
PK03705.1 Cannabis sativa PK03705.1 N 0.788
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.788
Ca_07051 Cicer arietinum Ca_07051 N 0.787
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.787
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.787
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.787
Bra007346 Brassica rapa Bra007346 N 0.786
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.786
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.784
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.784
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.783
Bo5g081360 Brassica oleracea Bo5g081360 N 0.782
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.782
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.782
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.782
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.782
Pm000471 Prunus mume Pm000471 N 0.782
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.782
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.782
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.782
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.782
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.782
MDP0000403797 Malus domestica MDP0000403797 N 0.782
MDP0000580545 Malus domestica MDP0000580545 N 0.782
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.782
PK05257.1 Cannabis sativa PK05257.1 N 0.781
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.780
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.780
Ca_27078 Cicer arietinum Ca_27078 N 0.780
Bo5g008880 Brassica oleracea Bo5g008880 N 0.779
Bo8g112550 Brassica oleracea Bo8g112550 N 0.779
Bra018638 Brassica rapa Bra018638 N 0.779
Bra031621 Brassica rapa Bra031621 N 0.779
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.778
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.778
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.778
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.778
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.778
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.778
OB08G26650 Oryza brachyantha OB08G26650 N 0.778
OBART08G19670 Oryza barthii OBART08G19670 N 0.778
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.778
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.778
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.778
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.778
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.778
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.778
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.778
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.778
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.778
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.778
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.778
OS08G0504000 Oryza sativa OS08G0504000 N 0.778
OS09G0485600 Oryza sativa OS09G0485600 N 0.778
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.778
Si013819m.g Setaria italica Si013819m.g N 0.778
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.778
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.778
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N 0.777
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N 0.775
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.774
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.774
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.774
mgf022981m Mimulus guttatus mgf022981m N 0.774
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.774
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.774
SapurV1A.0111s0170 Salix purpurea SapurV1A.0111s0170 N 0.774
SapurV1A.2210s0020 Salix purpurea SapurV1A.2210s0020 N 0.774
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.774
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.772
F775_14972 Aegilops tauschii F775_14972 N 0.772
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.772
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.772
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.772
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.772
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.772
OBART06G20890 Oryza barthii OBART06G20890 N 0.772
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.772
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.772
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.772
Si029897m.g Setaria italica Si029897m.g N 0.772
TCM_040610 Theobroma cacao TCM_040610 N 0.772
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.772
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.772
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.772
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.772
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.772
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.772
Ca_21713 Cicer arietinum Ca_21713 N 0.772
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.772
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.772
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.772
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.772
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.772
WIP3 Arabidopsis thaliana AT1G08290 N 0.769
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N 0.769
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N 0.769
Carubv10009617m.g Capsella rubella Carubv10009617m.g N 0.769
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N 0.769
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.768
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.768
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.768
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.764
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.764
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.764
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.764
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.764
BGIOSGA000452 Oryza indica BGIOSGA000452 N 0.762
BRADI2G23870 Brachypodium distachyon BRADI2G23870 N 0.762
BRADI2G55540 Brachypodium distachyon BRADI2G55540 N 0.762
F775_11193 Aegilops tauschii F775_11193 N 0.762
GRMZM2G000836 Zea mays GRMZM2G000836 N 0.762
LPERR01G32600 Leersia perrieri LPERR01G32600 N 0.762
OB05G26090 Oryza brachyantha OB05G26090 N 0.762
OBART01G37960 Oryza barthii OBART01G37960 N 0.762
OGLUM01G42130 Oryza glumaepatula OGLUM01G42130 N 0.762
OGLUM05G19360 Oryza glumaepatula OGLUM05G19360 N 0.762
OMERI01G34920 Oryza meridionalis OMERI01G34920 N 0.762
ONIVA04G25710 Oryza nivara ONIVA04G25710 N 0.762
OPUNC01G36780 Oryza punctata OPUNC01G36780 N 0.762
ORGLA01G0317700 Oryza glaberrima ORGLA01G0317700 N 0.762
ORUFI01G41290 Oryza rufipogon ORUFI01G41290 N 0.762
OS01G0859100 Oryza sativa OS01G0859100 N 0.762
Sb09g021850 Sorghum bicolor Sb09g021850 N 0.762
Si022296m.g Setaria italica Si022296m.g N 0.762
TRAES3BF099700020CFD_g Triticum aestivum TRAES3BF099700020CFD_g N 0.762
Pavir.J11927 Panicum virgatum Pavir.J11927 N 0.762
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N 0.760
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.758
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N 0.758
Cla008675 Citrullus lanatus Cla008675 N 0.758
mgf019910m Mimulus guttatus mgf019910m N 0.758
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N 0.758