MDP0000144266 (Malus domestica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 MDP0000144266 T143173_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000144266 C2H2 ZF 302 323
MDP0000144266 C2H2 ZF 322 351

Links

Other C2H2 ZF family TFs
Other Malus domestica TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000142494 Malus domestica MDP0000142494 N 0.825
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.816
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.816
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.816
TCM_005892 Theobroma cacao TCM_005892 N 0.816
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.816
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.810
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.810
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.810
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.810
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.810
30061.m000294 Ricinus communis 30061.m000294 N 0.810
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.806
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.806
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.806
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.806
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.806
29908.m006047 Ricinus communis 29908.m006047 N 0.803
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.803
TCM_034881 Theobroma cacao TCM_034881 N 0.797
TT1 Vitis vinifera VIT_18s0001g05860 N 0.797
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.797
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.797
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.797
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.796
MDP0000573922 Malus domestica MDP0000573922 N 0.794
Bo5g081360 Brassica oleracea Bo5g081360 N 0.792
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.792
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.792
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.792
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.790
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.790
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.790
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.790
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.790
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.790
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.790
TCM_041441 Theobroma cacao TCM_041441 N 0.790
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.790
Ca_16482 Cicer arietinum Ca_16482 N 0.790
Pm001374 Prunus mume Pm001374 N 0.790
30055.m001542 Ricinus communis 30055.m001542 N 0.790
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.790
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.790
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.790
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.790
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.790
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.790
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.790
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.790
MDP0000131949 Malus domestica MDP0000131949 N 0.790
MDP0000300013 Malus domestica MDP0000300013 N 0.790
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.790
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.790
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.790
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.787
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.787
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.787
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.786
WIP2 Arabidopsis thaliana AT3G57670 N 0.786
Bo4g111000 Brassica oleracea Bo4g111000 N 0.786
Bo6g073120 Brassica oleracea Bo6g073120 N 0.786
Bo8g092070 Brassica oleracea Bo8g092070 N 0.786
Bra003295 Brassica rapa Bra003295 N 0.786
Bra014612 Brassica rapa Bra014612 N 0.786
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.786
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.786
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.786
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.786
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.786
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.786
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.786
TCM_024788 Theobroma cacao TCM_024788 N 0.786
NTT Vitis vinifera VIT_08s0007g08070 N 0.786
Ca_07269 Cicer arietinum Ca_07269 N 0.786
Cla008187 Citrullus lanatus Cla008187 N 0.786
Cla015481 Citrullus lanatus Cla015481 N 0.786
Pm025853 Prunus mume Pm025853 N 0.786
27810.m000651 Ricinus communis 27810.m000651 N 0.786
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.786
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.786
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.786
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.786
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.786
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.786
mgf022319m Mimulus guttatus mgf022319m N 0.786
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.786
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.786
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.786
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.786
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.786
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.786
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.786
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.786
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.786
MDP0000601705 Malus domestica MDP0000601705 N 0.786
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.786
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.786
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.786
PK03705.1 Cannabis sativa PK03705.1 N 0.786
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.786
Bra007346 Brassica rapa Bra007346 N 0.785
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.782
F775_14972 Aegilops tauschii F775_14972 N 0.782
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.782
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.782
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.782
Si029897m.g Setaria italica Si029897m.g N 0.782
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.782
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.782
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.782
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.782
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.782
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.782
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.781
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.780
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.780
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.780
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.780
Pm000471 Prunus mume Pm000471 N 0.780
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.780
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.780
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.780
MDP0000403797 Malus domestica MDP0000403797 N 0.780
MDP0000580545 Malus domestica MDP0000580545 N 0.780
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.780
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.779
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.779
Ca_27078 Cicer arietinum Ca_27078 N 0.779
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.779
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.777
Cla000184 Citrullus lanatus Cla000184 N 0.777
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.777
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.777
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.776
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.776
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.776
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.776
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.776
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.776
OB08G26650 Oryza brachyantha OB08G26650 N 0.776
OBART08G19670 Oryza barthii OBART08G19670 N 0.776
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.776
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.776
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.776
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.776
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.776
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.776
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.776
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.776
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.776
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.776
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.776
OS08G0504000 Oryza sativa OS08G0504000 N 0.776
OS09G0485600 Oryza sativa OS09G0485600 N 0.776
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.776
Si013819m.g Setaria italica Si013819m.g N 0.776
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.776
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.776
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.773
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.773
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.773
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.773
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.773
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.773
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.773
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.773
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.773
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.771
30169.m006417 Ricinus communis 30169.m006417 N 0.771
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.771
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.771
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.770
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.770
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.770
OBART06G20890 Oryza barthii OBART06G20890 N 0.770
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.770
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.770
TCM_040610 Theobroma cacao TCM_040610 N 0.770
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.770
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.770
Ca_21713 Cicer arietinum Ca_21713 N 0.770
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.770
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.770
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.770
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.770
Ca_07051 Cicer arietinum Ca_07051 N 0.766
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.766
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.766
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.766
PK05257.1 Cannabis sativa PK05257.1 N 0.766
Bo5g008880 Brassica oleracea Bo5g008880 N 0.763
Bo8g112550 Brassica oleracea Bo8g112550 N 0.763
Bra018638 Brassica rapa Bra018638 N 0.763
Bra031621 Brassica rapa Bra031621 N 0.763
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.763
SapurV1A.0111s0170 Salix purpurea SapurV1A.0111s0170 N 0.763
SapurV1A.2210s0020 Salix purpurea SapurV1A.2210s0020 N 0.763
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.762
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.762
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.761
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.761
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N 0.759
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N 0.757
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N 0.756
Cla008675 Citrullus lanatus Cla008675 N 0.756
mgf019910m Mimulus guttatus mgf019910m N 0.756
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N 0.756