GLYMA13G01720 (Glycine max)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLYMA13G01720 T118406_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G01720.1 C2H2 ZF 176 197
GLYMA13G01720.1 C2H2 ZF 196 222

Links

Other C2H2 ZF family TFs
Other Glycine max TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.827
Ca_27078 Cicer arietinum Ca_27078 N 0.827
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.814
Cla015481 Citrullus lanatus Cla015481 N 0.808
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.808
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.808
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.804
29908.m006047 Ricinus communis 29908.m006047 N 0.803
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.803
TCM_034881 Theobroma cacao TCM_034881 N 0.797
TT1 Vitis vinifera VIT_18s0001g05860 N 0.797
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.797
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.797
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.797
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.797
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.797
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.797
MDP0000573922 Malus domestica MDP0000573922 N 0.795
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.791
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.791
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.791
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.790
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.790
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.790
TCM_005892 Theobroma cacao TCM_005892 N 0.790
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.790
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.790
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.790
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.788
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.788
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.784
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.784
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.784
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.784
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.784
30061.m000294 Ricinus communis 30061.m000294 N 0.784
mgf022319m Mimulus guttatus mgf022319m N 0.784
SapurV1A.0111s0170 Salix purpurea SapurV1A.0111s0170 N 0.784
SapurV1A.2210s0020 Salix purpurea SapurV1A.2210s0020 N 0.784
Bo5g008880 Brassica oleracea Bo5g008880 N 0.782
Bo8g112550 Brassica oleracea Bo8g112550 N 0.782
Bra018638 Brassica rapa Bra018638 N 0.782
Bra031621 Brassica rapa Bra031621 N 0.782
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.780
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.780
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.780
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.780
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.780
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N 0.779
MDP0000144266 Malus domestica MDP0000144266 N 0.779
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.779
Bo5g081360 Brassica oleracea Bo5g081360 N 0.778
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.778
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.778
Cla000184 Citrullus lanatus Cla000184 N 0.778
Cla008675 Citrullus lanatus Cla008675 N 0.778
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.778
mgf022981m Mimulus guttatus mgf022981m N 0.778
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N 0.778
MDP0000142494 Malus domestica MDP0000142494 N 0.777
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.774
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.774
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.774
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.774
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.774
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.774
OB08G26650 Oryza brachyantha OB08G26650 N 0.774
OBART08G19670 Oryza barthii OBART08G19670 N 0.774
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.774
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.774
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.774
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.774
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.774
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.774
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.774
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.774
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.774
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.774
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.774
OS08G0504000 Oryza sativa OS08G0504000 N 0.774
OS09G0485600 Oryza sativa OS09G0485600 N 0.774
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.774
Si013819m.g Setaria italica Si013819m.g N 0.774
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.774
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.774
WIP3 Arabidopsis thaliana AT1G08290 N 0.773
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N 0.773
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N 0.773
Carubv10009617m.g Capsella rubella Carubv10009617m.g N 0.773
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N 0.773
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.770
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.770
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.770
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.770
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.770
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.768
F775_14972 Aegilops tauschii F775_14972 N 0.768
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.768
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.768
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.768
Si029897m.g Setaria italica Si029897m.g N 0.768
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.768
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.768
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.768
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.768
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.768
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.764
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.764
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.764
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.764
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N 0.764
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.764
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.764
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.764
TCM_041441 Theobroma cacao TCM_041441 N 0.764
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.764
Ca_07051 Cicer arietinum Ca_07051 N 0.764
Pm001374 Prunus mume Pm001374 N 0.764
30055.m001542 Ricinus communis 30055.m001542 N 0.764
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.764
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.764
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.764
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.764
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.764
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.764
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.764
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.764
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.764
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.764
MDP0000131949 Malus domestica MDP0000131949 N 0.764
MDP0000300013 Malus domestica MDP0000300013 N 0.764
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.764
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.764
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.764
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.760
WIP2 Arabidopsis thaliana AT3G57670 N 0.760
Bo4g111000 Brassica oleracea Bo4g111000 N 0.760
Bo6g073120 Brassica oleracea Bo6g073120 N 0.760
Bo8g092070 Brassica oleracea Bo8g092070 N 0.760
Bra003295 Brassica rapa Bra003295 N 0.760
Bra014612 Brassica rapa Bra014612 N 0.760
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.760
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.760
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.760
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.760
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.760
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.760
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.760
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.760
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.760
TCM_024788 Theobroma cacao TCM_024788 N 0.760
NTT Vitis vinifera VIT_08s0007g08070 N 0.760
Ca_07269 Cicer arietinum Ca_07269 N 0.760
Cla008187 Citrullus lanatus Cla008187 N 0.760
Pm025853 Prunus mume Pm025853 N 0.760
27810.m000651 Ricinus communis 27810.m000651 N 0.760
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.760
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.760
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.760
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.760
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.760
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.760
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.760
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.760
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.760
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.760
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.760
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.760
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.760
MDP0000601705 Malus domestica MDP0000601705 N 0.760
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.760
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.760
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.760
PK03705.1 Cannabis sativa PK03705.1 N 0.760
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.760
Ca_16482 Cicer arietinum Ca_16482 N 0.759
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.758
Bra007346 Brassica rapa Bra007346 N 0.758
OBART09G03640 Oryza barthii OBART09G03640 N 0.758
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.758
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.758
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.758
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.758
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.758
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.758
PK05257.1 Cannabis sativa PK05257.1 N 0.758
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.758