MDP0000142494 (Malus domestica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 MDP0000142494 T143171_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000142494 C2H2 ZF 348 369
MDP0000142494 C2H2 ZF 368 394

Links

Other C2H2 ZF family TFs
Other Malus domestica TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000144266 Malus domestica MDP0000144266 N 0.825
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.814
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.814
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.814
TCM_005892 Theobroma cacao TCM_005892 N 0.814
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.814
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.808
30061.m000294 Ricinus communis 30061.m000294 N 0.808
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.808
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.808
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.808
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.808
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.805
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.805
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.805
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.805
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.805
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.801
29908.m006047 Ricinus communis 29908.m006047 N 0.801
MDP0000573922 Malus domestica MDP0000573922 N 0.796
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.795
TCM_034881 Theobroma cacao TCM_034881 N 0.795
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.795
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.795
TT1 Vitis vinifera VIT_18s0001g05860 N 0.795
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.795
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.790
Bo5g081360 Brassica oleracea Bo5g081360 N 0.790
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.790
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.790
TCM_041441 Theobroma cacao TCM_041441 N 0.789
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.789
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.789
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.789
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.789
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.789
30055.m001542 Ricinus communis 30055.m001542 N 0.789
Ca_16482 Cicer arietinum Ca_16482 N 0.789
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.789
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.789
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.789
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.789
Pm001374 Prunus mume Pm001374 N 0.789
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.789
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.789
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.789
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.789
MDP0000131949 Malus domestica MDP0000131949 N 0.789
MDP0000300013 Malus domestica MDP0000300013 N 0.789
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.789
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.789
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.789
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.789
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.789
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.789
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.785
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.785
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.785
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.785
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.785
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.785
NTT Vitis vinifera VIT_08s0007g08070 N 0.785
TCM_024788 Theobroma cacao TCM_024788 N 0.785
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.785
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.785
PK03705.1 Cannabis sativa PK03705.1 N 0.785
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.785
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.785
MDP0000601705 Malus domestica MDP0000601705 N 0.785
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.785
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.785
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.785
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.785
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.785
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.785
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.785
Pm025853 Prunus mume Pm025853 N 0.785
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.785
27810.m000651 Ricinus communis 27810.m000651 N 0.785
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.785
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.785
Cla008187 Citrullus lanatus Cla008187 N 0.785
Ca_07269 Cicer arietinum Ca_07269 N 0.785
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.785
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.785
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.785
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.785
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.785
Bra014612 Brassica rapa Bra014612 N 0.785
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.785
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.785
Bra007346 Brassica rapa Bra007346 N 0.785
Bo6g073120 Brassica oleracea Bo6g073120 N 0.785
Bo4g111000 Brassica oleracea Bo4g111000 N 0.785
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.785
WIP2 Arabidopsis thaliana AT3G57670 N 0.785
Bra003295 Brassica rapa Bra003295 N 0.785
Bo8g092070 Brassica oleracea Bo8g092070 N 0.785
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.784
mgf022319m Mimulus guttatus mgf022319m N 0.784
Cla015481 Citrullus lanatus Cla015481 N 0.784
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.784
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.780
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.780
F775_14972 Aegilops tauschii F775_14972 N 0.780
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.780
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.780
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.780
Si029897m.g Setaria italica Si029897m.g N 0.780
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.780
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.780
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.780
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.780
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.780
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.780
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.779
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.779
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.779
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.779
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.779
Pm000471 Prunus mume Pm000471 N 0.779
MDP0000403797 Malus domestica MDP0000403797 N 0.779
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.779
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.779
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.779
MDP0000580545 Malus domestica MDP0000580545 N 0.779
Ca_27078 Cicer arietinum Ca_27078 N 0.777
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.777
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.777
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.777
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.775
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.775
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.775
Cla000184 Citrullus lanatus Cla000184 N 0.775
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.774
OB08G26650 Oryza brachyantha OB08G26650 N 0.774
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.774
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.774
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.774
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.774
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.774
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.774
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.774
OBART08G19670 Oryza barthii OBART08G19670 N 0.774
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.774
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.774
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.774
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.774
OS09G0485600 Oryza sativa OS09G0485600 N 0.774
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.774
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.774
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.774
OS08G0504000 Oryza sativa OS08G0504000 N 0.774
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.774
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.774
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.774
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.774
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.774
Si013819m.g Setaria italica Si013819m.g N 0.774
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.771
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.771
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.771
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.771
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.771
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.771
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.771
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.771
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.771
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.769
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.769
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.769
TCM_040610 Theobroma cacao TCM_040610 N 0.769
30169.m006417 Ricinus communis 30169.m006417 N 0.769
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.769
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.769
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.769
Ca_21713 Cicer arietinum Ca_21713 N 0.769
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.769
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.769
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.769
OBART06G20890 Oryza barthii OBART06G20890 N 0.769
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.769
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.769
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.769
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.769
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.769
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.765
PK05257.1 Cannabis sativa PK05257.1 N 0.765
Ca_07051 Cicer arietinum Ca_07051 N 0.765
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.765
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.765
Bo5g008880 Brassica oleracea Bo5g008880 N 0.761
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.761
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.761
SapurV1A.2210s0020 Salix purpurea SapurV1A.2210s0020 N 0.761
Bra031621 Brassica rapa Bra031621 N 0.761
Bra018638 Brassica rapa Bra018638 N 0.761
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.761
Bo8g112550 Brassica oleracea Bo8g112550 N 0.761
SapurV1A.0111s0170 Salix purpurea SapurV1A.0111s0170 N 0.761
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.759
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.759
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N 0.757