gw1.359.34.1 (Physcomitrella patens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 gw1.359.34.1 T140069_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.359.34.1 C2H2 ZF 102 123
gw1.359.34.1 C2H2 ZF 122 148

Links

Other C2H2 ZF family TFs
Other Physcomitrella patens TFs

272 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.827
TCM_040610 Theobroma cacao TCM_040610 N 0.827
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.827
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.821
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.821
OBART06G20890 Oryza barthii OBART06G20890 N 0.821
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.821
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.821
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.821
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.821
Ca_21713 Cicer arietinum Ca_21713 N 0.821
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.821
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.821
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.818
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.818
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.817
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.817
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.817
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.817
Pm000471 Prunus mume Pm000471 N 0.817
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.817
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.817
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.817
MDP0000403797 Malus domestica MDP0000403797 N 0.817
MDP0000580545 Malus domestica MDP0000580545 N 0.817
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.817
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.811
WIP2 Arabidopsis thaliana AT3G57670 N 0.811
Bo4g111000 Brassica oleracea Bo4g111000 N 0.811
Bo6g073120 Brassica oleracea Bo6g073120 N 0.811
Bo8g092070 Brassica oleracea Bo8g092070 N 0.811
Bra003295 Brassica rapa Bra003295 N 0.811
Bra014612 Brassica rapa Bra014612 N 0.811
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.811
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.811
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.811
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.811
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.811
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.811
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.811
TCM_024788 Theobroma cacao TCM_024788 N 0.811
NTT Vitis vinifera VIT_08s0007g08070 N 0.811
Ca_07269 Cicer arietinum Ca_07269 N 0.811
Cla008187 Citrullus lanatus Cla008187 N 0.811
Pm025853 Prunus mume Pm025853 N 0.811
27810.m000651 Ricinus communis 27810.m000651 N 0.811
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.811
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.811
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.811
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.811
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.811
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.811
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.811
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.811
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.811
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.811
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.811
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.811
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.811
MDP0000601705 Malus domestica MDP0000601705 N 0.811
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.811
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.811
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.811
PK03705.1 Cannabis sativa PK03705.1 N 0.811
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.811
Bra007346 Brassica rapa Bra007346 N 0.810
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.808
30169.m006417 Ricinus communis 30169.m006417 N 0.808
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.808
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.803
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.802
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.802
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.797
WIP6 Arabidopsis thaliana AT1G13290 N 0.797
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.797
Bo5g015200 Brassica oleracea Bo5g015200 N 0.797
Bra019822 Brassica rapa Bra019822 N 0.797
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.797
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.797
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.797
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.797
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.797
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.797
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.797
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.797
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.797
OB06G28740 Oryza brachyantha OB06G28740 N 0.797
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.797
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.797
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.797
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.797
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.797
OS06G0612300 Oryza sativa OS06G0612300 N 0.797
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.797
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.797
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.797
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.797
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.797
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.797
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.797
Si006616m.g Setaria italica Si006616m.g N 0.797
TCM_011858 Theobroma cacao TCM_011858 N 0.797
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.797
Ca_08435 Cicer arietinum Ca_08435 N 0.797
Ca_24699 Cicer arietinum Ca_24699 N 0.797
Cla002714 Citrullus lanatus Cla002714 N 0.797
Pm029018 Prunus mume Pm029018 N 0.797
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.797
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.797
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.797
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.797
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.797
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.797
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.797
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.797
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.797
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.797
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.797
MDP0000303483 Malus domestica MDP0000303483 N 0.797
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.797
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.797
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.797
Cla008675 Citrullus lanatus Cla008675 N 0.793
mgf019910m Mimulus guttatus mgf019910m N 0.793
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.788
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.788
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.788
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.788
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.788
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.788
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.788
TCM_041441 Theobroma cacao TCM_041441 N 0.788
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.788
Pm001374 Prunus mume Pm001374 N 0.788
30055.m001542 Ricinus communis 30055.m001542 N 0.788
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.788
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.788
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.788
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.788
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.788
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.788
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.788
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.788
MDP0000131949 Malus domestica MDP0000131949 N 0.788
MDP0000300013 Malus domestica MDP0000300013 N 0.788
MDP0000899280 Malus domestica MDP0000899280 N 0.788
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.788
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.788
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.788
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.787
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.787
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N 0.787
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.784
OBART09G03640 Oryza barthii OBART09G03640 N 0.784
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.784
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.784
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.784
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.784
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.784
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.784
Ca_16482 Cicer arietinum Ca_16482 N 0.783
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.782
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.782
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.782
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.782
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.782
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.782
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.782
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.782
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.782
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.782
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.782
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.782
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.782
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.782
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.782
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.782
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.782
OS09G0307400 Oryza sativa OS09G0307400 N 0.782
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.782
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.782
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.782
Si030360m.g Setaria italica Si030360m.g N 0.782
TCM_005892 Theobroma cacao TCM_005892 N 0.782
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.782
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.782
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.782
30061.m000294 Ricinus communis 30061.m000294 N 0.782
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.782
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.782
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.782
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.782
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.782
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.778
GSMUA_Achr5G26210_001 Musa acuminata GSMUA_Achr5G26210_001 N 0.774
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.772
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.772
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.772
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.772
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.772
OBART02G07320 Oryza barthii OBART02G07320 N 0.770
ORGLA02G0068500 Oryza glaberrima ORGLA02G0068500 N 0.770
MDP0000144266 Malus domestica MDP0000144266 N 0.770
MDP0000142494 Malus domestica MDP0000142494 N 0.769
GSMUA_Achr11G18950_001 Musa acuminata GSMUA_Achr11G18950_001 N 0.768
TCM_034881 Theobroma cacao TCM_034881 N 0.768
TT1 Vitis vinifera VIT_18s0001g05860 N 0.768
Cla000184 Citrullus lanatus Cla000184 N 0.768
29908.m006047 Ricinus communis 29908.m006047 N 0.768
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.768
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.768
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.768
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.768
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.768
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.767
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.767
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.767
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.767
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.767
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.767
OB08G26650 Oryza brachyantha OB08G26650 N 0.767
OBART08G19670 Oryza barthii OBART08G19670 N 0.767
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.767
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.767
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.767
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.767
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.767
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.767
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.767
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.767
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.767
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.767
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.767
OS08G0504000 Oryza sativa OS08G0504000 N 0.767
OS09G0485600 Oryza sativa OS09G0485600 N 0.767
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.767
Si013819m.g Setaria italica Si013819m.g N 0.767
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.767
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.767
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.767
SapurV1A.1001s0040 Salix purpurea SapurV1A.1001s0040 N 0.767
MDP0000573922 Malus domestica MDP0000573922 N 0.766
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N 0.764
Ca_07051 Cicer arietinum Ca_07051 N 0.764
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.764
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.764
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.764
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.764
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.762
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.761
F775_14972 Aegilops tauschii F775_14972 N 0.761
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.761
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.761
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.761
Si029897m.g Setaria italica Si029897m.g N 0.761
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.761
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.761
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.761
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.761
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.761
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.759
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.758
Cla015481 Citrullus lanatus Cla015481 N 0.758
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.758
mgf022319m Mimulus guttatus mgf022319m N 0.758
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.758
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.758
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.758
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.758
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.758
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.758
PK05257.1 Cannabis sativa PK05257.1 N 0.758