Si006616m.g (Setaria italica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Si006616m.g T128654_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si006616m C2H2 ZF 274 295
Si006616m C2H2 ZF 296 320

Links

Other C2H2 ZF family TFs
Other Setaria italica TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.827
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.827
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.827
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.827
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.827
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.827
OB06G28740 Oryza brachyantha OB06G28740 N 0.827
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.827
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.827
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.827
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.827
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.827
OS06G0612300 Oryza sativa OS06G0612300 N 0.827
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.827
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.827
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N 0.817
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.803
OBART06G20890 Oryza barthii OBART06G20890 N 0.803
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.803
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.803
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.797
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.797
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.797
TCM_040610 Theobroma cacao TCM_040610 N 0.797
Ca_21713 Cicer arietinum Ca_21713 N 0.797
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.797
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.797
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.797
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.797
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.788
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.788
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.787
WIP2 Arabidopsis thaliana AT3G57670 N 0.787
Bo4g111000 Brassica oleracea Bo4g111000 N 0.787
Bo6g073120 Brassica oleracea Bo6g073120 N 0.787
Bo8g092070 Brassica oleracea Bo8g092070 N 0.787
Bra003295 Brassica rapa Bra003295 N 0.787
Bra014612 Brassica rapa Bra014612 N 0.787
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.787
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.787
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.787
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.787
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.787
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.787
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.787
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.787
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.787
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.787
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.787
TCM_024788 Theobroma cacao TCM_024788 N 0.787
NTT Vitis vinifera VIT_08s0007g08070 N 0.787
Ca_07269 Cicer arietinum Ca_07269 N 0.787
Cla008187 Citrullus lanatus Cla008187 N 0.787
Pm000471 Prunus mume Pm000471 N 0.787
Pm025853 Prunus mume Pm025853 N 0.787
27810.m000651 Ricinus communis 27810.m000651 N 0.787
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.787
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.787
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.787
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.787
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.787
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.787
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.787
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.787
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.787
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.787
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.787
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.787
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.787
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.787
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.787
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.787
MDP0000403797 Malus domestica MDP0000403797 N 0.787
MDP0000580545 Malus domestica MDP0000580545 N 0.787
MDP0000601705 Malus domestica MDP0000601705 N 0.787
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.787
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.787
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.787
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.787
PK03705.1 Cannabis sativa PK03705.1 N 0.787
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.787
Bra007346 Brassica rapa Bra007346 N 0.786
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.778
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.778
30169.m006417 Ricinus communis 30169.m006417 N 0.778
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.778
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.778
OS02G0196100 Oryza sativa OS02G0196100 N 0.777
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.773
WIP6 Arabidopsis thaliana AT1G13290 N 0.773
Bo5g015200 Brassica oleracea Bo5g015200 N 0.773
Bra019822 Brassica rapa Bra019822 N 0.773
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.773
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.773
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.773
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.773
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.773
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.773
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.773
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.773
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.773
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.773
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.773
TCM_011858 Theobroma cacao TCM_011858 N 0.773
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.773
Ca_08435 Cicer arietinum Ca_08435 N 0.773
Ca_24699 Cicer arietinum Ca_24699 N 0.773
Cla002714 Citrullus lanatus Cla002714 N 0.773
Pm029018 Prunus mume Pm029018 N 0.773
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.773
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.773
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.773
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.773
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.773
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.773
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.773
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.773
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.773
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.773
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.773
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.773
MDP0000303483 Malus domestica MDP0000303483 N 0.773
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.773
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.773
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.766
OBART09G03640 Oryza barthii OBART09G03640 N 0.766
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.766
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.766
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.766
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.766
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.766
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.766
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.764
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.764
MDP0000899280 Malus domestica MDP0000899280 N 0.764
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.764
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.763
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.763
Cla008675 Citrullus lanatus Cla008675 N 0.763
mgf019910m Mimulus guttatus mgf019910m N 0.763
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.758
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.758
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.758
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.758
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.758
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.758
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.758
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.758
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.758
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.758
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.758
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.758
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.758
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.758
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.758
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.758
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.758
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.758
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.758
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.758
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.758
OS09G0307400 Oryza sativa OS09G0307400 N 0.758
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.758
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.758
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.758
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.758
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.758
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.758
Si030360m.g Setaria italica Si030360m.g N 0.758
TCM_005892 Theobroma cacao TCM_005892 N 0.758
TCM_041441 Theobroma cacao TCM_041441 N 0.758
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.758
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.758
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.758
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.758
Pm001374 Prunus mume Pm001374 N 0.758
30055.m001542 Ricinus communis 30055.m001542 N 0.758
30061.m000294 Ricinus communis 30061.m000294 N 0.758
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.758
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.758
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.758
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.758
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.758
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.758
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.758
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.758
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.758
MDP0000131949 Malus domestica MDP0000131949 N 0.758
MDP0000300013 Malus domestica MDP0000300013 N 0.758
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.758
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.758
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.758