Lus10031838.g (Linum usitatissimum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Lus10031838.g T143141_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10031838 C2H2 ZF 301 322
Lus10031838 C2H2 ZF 321 347

Links

Other C2H2 ZF family TFs
Other Linum usitatissimum TFs

255 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.827
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.818
TCM_040610 Theobroma cacao TCM_040610 N 0.818
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.818
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.818
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.817
30169.m006417 Ricinus communis 30169.m006417 N 0.817
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.817
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.812
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.811
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.811
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.811
OBART06G20890 Oryza barthii OBART06G20890 N 0.811
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.811
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.811
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.811
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.811
Ca_21713 Cicer arietinum Ca_21713 N 0.811
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.811
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.811
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.811
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.808
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.808
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.808
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.808
Pm000471 Prunus mume Pm000471 N 0.808
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.808
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.808
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.808
MDP0000403797 Malus domestica MDP0000403797 N 0.808
MDP0000580545 Malus domestica MDP0000580545 N 0.808
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.808
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.802
WIP2 Arabidopsis thaliana AT3G57670 N 0.802
Bo4g111000 Brassica oleracea Bo4g111000 N 0.802
Bo6g073120 Brassica oleracea Bo6g073120 N 0.802
Bo8g092070 Brassica oleracea Bo8g092070 N 0.802
Bra003295 Brassica rapa Bra003295 N 0.802
Bra014612 Brassica rapa Bra014612 N 0.802
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.802
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.802
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.802
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.802
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.802
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.802
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.802
TCM_024788 Theobroma cacao TCM_024788 N 0.802
NTT Vitis vinifera VIT_08s0007g08070 N 0.802
Ca_07269 Cicer arietinum Ca_07269 N 0.802
Cla008187 Citrullus lanatus Cla008187 N 0.802
Pm025853 Prunus mume Pm025853 N 0.802
27810.m000651 Ricinus communis 27810.m000651 N 0.802
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.802
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.802
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.802
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.802
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.802
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.802
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.802
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.802
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.802
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.802
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.802
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.802
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.802
MDP0000601705 Malus domestica MDP0000601705 N 0.802
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.802
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.802
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.802
PK03705.1 Cannabis sativa PK03705.1 N 0.802
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.802
Bra007346 Brassica rapa Bra007346 N 0.800
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.797
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.797
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.797
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.797
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.797
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.797
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.797
TCM_041441 Theobroma cacao TCM_041441 N 0.797
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.797
Pm001374 Prunus mume Pm001374 N 0.797
30055.m001542 Ricinus communis 30055.m001542 N 0.797
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.797
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.797
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.797
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.797
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.797
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.797
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.797
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.797
MDP0000131949 Malus domestica MDP0000131949 N 0.797
MDP0000300013 Malus domestica MDP0000300013 N 0.797
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.797
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.797
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.797
Ca_16482 Cicer arietinum Ca_16482 N 0.792
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.791
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.791
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.791
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.791
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.791
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.791
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.791
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.791
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.791
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.791
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.791
OS09G0307400 Oryza sativa OS09G0307400 N 0.791
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.791
Si030360m.g Setaria italica Si030360m.g N 0.791
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.791
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.791
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.791
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.791
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.791
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.791
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.791
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.788
WIP6 Arabidopsis thaliana AT1G13290 N 0.788
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.788
Bo5g015200 Brassica oleracea Bo5g015200 N 0.788
Bra019822 Brassica rapa Bra019822 N 0.788
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.788
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.788
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.788
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.788
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.788
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.788
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.788
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.788
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.788
OB06G28740 Oryza brachyantha OB06G28740 N 0.788
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.788
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.788
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.788
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.788
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.788
OS06G0612300 Oryza sativa OS06G0612300 N 0.788
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.788
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.788
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.788
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.788
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.788
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.788
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.788
Si006616m.g Setaria italica Si006616m.g N 0.788
TCM_011858 Theobroma cacao TCM_011858 N 0.788
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.788
Ca_08435 Cicer arietinum Ca_08435 N 0.788
Ca_24699 Cicer arietinum Ca_24699 N 0.788
Cla002714 Citrullus lanatus Cla002714 N 0.788
Pm029018 Prunus mume Pm029018 N 0.788
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.788
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.788
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.788
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.788
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.788
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.788
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.788
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.788
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.788
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.788
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.788
MDP0000303483 Malus domestica MDP0000303483 N 0.788
MDP0000899280 Malus domestica MDP0000899280 N 0.788
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.788
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.788
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.788
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.787
GSMUA_Achr5G26210_001 Musa acuminata GSMUA_Achr5G26210_001 N 0.784
Cla008675 Citrullus lanatus Cla008675 N 0.784
mgf019910m Mimulus guttatus mgf019910m N 0.784
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.782
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.782
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.782
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.782
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.782
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.778
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.778
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N 0.778
Cla000184 Citrullus lanatus Cla000184 N 0.778
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.778
GSMUA_Achr11G18950_001 Musa acuminata GSMUA_Achr11G18950_001 N 0.777
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.774
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N 0.774
OBART09G03640 Oryza barthii OBART09G03640 N 0.774
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.774
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.774
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.774
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.774
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.774
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.774
Ca_07051 Cicer arietinum Ca_07051 N 0.774
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.774
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.774
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.774
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.772
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.772
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.772
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.772
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.772
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.772
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.772
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.772
TCM_005892 Theobroma cacao TCM_005892 N 0.772
30061.m000294 Ricinus communis 30061.m000294 N 0.772
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.772
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.768
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.767
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.767
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.767
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.767
PK05257.1 Cannabis sativa PK05257.1 N 0.767
OBART02G07320 Oryza barthii OBART02G07320 N 0.761
ORGLA02G0068500 Oryza glaberrima ORGLA02G0068500 N 0.761
MDP0000144266 Malus domestica MDP0000144266 N 0.761
TCM_034881 Theobroma cacao TCM_034881 N 0.759
TT1 Vitis vinifera VIT_18s0001g05860 N 0.759
29908.m006047 Ricinus communis 29908.m006047 N 0.759
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.759
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.759
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.759
MDP0000142494 Malus domestica MDP0000142494 N 0.759
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.759
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.758
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.758
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.758
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.758
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.758
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.758
OB08G26650 Oryza brachyantha OB08G26650 N 0.758
OBART08G19670 Oryza barthii OBART08G19670 N 0.758
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.758
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.758
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.758
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.758
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.758
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.758
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.758
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.758
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.758
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.758
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.758
OS08G0504000 Oryza sativa OS08G0504000 N 0.758
OS09G0485600 Oryza sativa OS09G0485600 N 0.758
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.758
Si013819m.g Setaria italica Si013819m.g N 0.758
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.758
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.758
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.758
SapurV1A.1001s0040 Salix purpurea SapurV1A.1001s0040 N 0.758
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.757
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.757
MDP0000573922 Malus domestica MDP0000573922 N 0.756