CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.1001s0040
(
Salix purpurea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SapurV1A.1001s0040
T143502_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.1001s0040.1.p
C2H2 ZF
198
219
FGCRKCGKPFAVIGDWRTHEKN
SapurV1A.1001s0040.1.p
C2H2 ZF
218
244
KNCGKVWFCICGSDFKHKRSLKDHVRA
Links
Other
C2H2 ZF
family TFs
Other
Salix purpurea
TFs
200 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA01G22120
Glycine max
GLYMA01G22120
N
0.797
GLYMA02G10970
Glycine max
GLYMA02G10970
N
0.797
POPTR_0010s13910
Populus trichocarpa
POPTR_0010s13910
N
0.797
PRUPE_ppa020013m2g
Prunus persica
PRUPE_ppa020013m2g
N
0.797
TCM_011858
Theobroma cacao
TCM_011858
N
0.797
Ca_24699
Cicer arietinum
Ca_24699
N
0.797
Pm029018
Prunus mume
Pm029018
N
0.797
Aquca_026_00228
Aquilegia coerulea
Aquca_026_00228
N
0.797
Lus10021700.g
Linum usitatissimum
Lus10021700.g
N
0.797
Lus10035044.g
Linum usitatissimum
Lus10035044.g
N
0.797
MDP0000303483
Malus domestica
MDP0000303483
N
0.797
chr2.CM1731.90.nc
Lotus japonicus
chr2.CM1731.90.nc
N
0.797
Ciclev10033535m.g
Citrus clementina
Ciclev10033535m.g
N
0.788
MDP0000899280
Malus domestica
MDP0000899280
N
0.788
orange1.1g046329m.g
Citrus sinensis
orange1.1g046329m.g
N
0.788
AMTR_s00093p00164790
Amborella trichopoda
AMTR_s00093p00164790
N
0.774
MTR_1g093095
Medicago truncatula
MTR_1g093095
N
0.774
SELMODRAFT_57106
Selaginella moellendorffii
SELMODRAFT_57106
N
0.774
SELMODRAFT_57114
Selaginella moellendorffii
SELMODRAFT_57114
N
0.774
DOT5
Vitis vinifera
VIT_01s0011g03100
N
0.774
Ca_08435
Cicer arietinum
Ca_08435
N
0.774
Cla002714
Citrullus lanatus
Cla002714
N
0.774
cassava46219.m1
Manihot esculenta
cassava46219.m1
N
0.774
Cucsa.248320
Cucumis sativus
Cucsa.248320
N
0.774
Eucgr.B03047
Eucalyptus grandis
Eucgr.B03047
N
0.774
evm.TU.contig_31438
Carica papaya
evm.TU.contig_31438
N
0.774
evm.TU.supercontig_1.215
Carica papaya
evm.TU.supercontig_1.215
N
0.774
Gorai.013G080100
Gossypium raimondii
Gorai.013G080100
N
0.774
WIP6
Arabidopsis thaliana
AT1G13290
N
0.767
BGIOSGA031001
Oryza indica
BGIOSGA031001
N
0.767
Bo5g015200
Brassica oleracea
Bo5g015200
N
0.767
Bra019822
Brassica rapa
Bra019822
N
0.767
BRADI3G39820
Brachypodium distachyon
BRADI3G39820
N
0.767
GLYMA10G34770
Glycine max
GLYMA10G34770
N
0.767
GLYMA20G32750
Glycine max
GLYMA20G32750
N
0.767
GRMZM2G061545
Zea mays
GRMZM2G061545
N
0.767
GRMZM2G071101
Zea mays
GRMZM2G071101
N
0.767
GRMZM2G445684
Zea mays
GRMZM2G445684
N
0.767
GSMUA_Achr3G11870_001
Musa acuminata
GSMUA_Achr3G11870_001
N
0.767
LPERR08G16620
Leersia perrieri
LPERR08G16620
N
0.767
LPERR09G10700
Leersia perrieri
LPERR09G10700
N
0.767
MLOC_65351
Hordeum vulgare
MLOC_65351
N
0.767
OB08G26650
Oryza brachyantha
OB08G26650
N
0.767
OBART06G20890
Oryza barthii
OBART06G20890
N
0.767
OBART08G19670
Oryza barthii
OBART08G19670
N
0.767
OGLUM08G20830
Oryza glumaepatula
OGLUM08G20830
N
0.767
OGLUM09G15150
Oryza glumaepatula
OGLUM09G15150
N
0.767
OMERI08G16450
Oryza meridionalis
OMERI08G16450
N
0.767
OMERI09G11270
Oryza meridionalis
OMERI09G11270
N
0.767
ONIVA08G21960
Oryza nivara
ONIVA08G21960
N
0.767
ONIVA09G15100
Oryza nivara
ONIVA09G15100
N
0.767
OPUNC08G17810
Oryza punctata
OPUNC08G17810
N
0.767
OPUNC09G12930
Oryza punctata
OPUNC09G12930
N
0.767
ORGLA08G0173000
Oryza glaberrima
ORGLA08G0173000
N
0.767
ORGLA09G0111700
Oryza glaberrima
ORGLA09G0111700
N
0.767
ORUFI09G15680
Oryza rufipogon
ORUFI09G15680
N
0.767
OS08G0504000
Oryza sativa
OS08G0504000
N
0.767
OS09G0485600
Oryza sativa
OS09G0485600
N
0.767
Sb07g028010
Sorghum bicolor
Sb07g028010
N
0.767
SELMODRAFT_110681
Selaginella moellendorffii
SELMODRAFT_110681
N
0.767
SELMODRAFT_128378
Selaginella moellendorffii
SELMODRAFT_128378
N
0.767
SELMODRAFT_36986
Selaginella moellendorffii
SELMODRAFT_36986
N
0.767
SELMODRAFT_36987
Selaginella moellendorffii
SELMODRAFT_36987
N
0.767
Si013819m.g
Setaria italica
Si013819m.g
N
0.767
TCM_040610
Theobroma cacao
TCM_040610
N
0.767
Traes_7AL_1070DBD71
Triticum aestivum
Traes_7AL_1070DBD71
N
0.767
TRIUR3_23735
Triticum urartu
TRIUR3_23735
N
0.767
Ca_21713
Cicer arietinum
Ca_21713
N
0.767
e_gw1.203.23.1
Physcomitrella patens
e_gw1.203.23.1
N
0.767
gw1.359.34.1
Physcomitrella patens
gw1.359.34.1
N
0.767
Bostr.13671s0117
Boechera stricta
Bostr.13671s0117
N
0.767
Cagra.3501s0170
Capsella grandiflora
Cagra.3501s0170
N
0.767
Carubv10012013m.g
Capsella rubella
Carubv10012013m.g
N
0.767
Eucgr.J00788
Eucalyptus grandis
Eucgr.J00788
N
0.767
Gorai.013G250800
Gossypium raimondii
Gorai.013G250800
N
0.767
Pavir.Fa00506
Panicum virgatum
Pavir.Fa00506
N
0.767
Pavir.Fb01879
Panicum virgatum
Pavir.Fb01879
N
0.767
Thhalv10009489m.g
Eutrema salsugineum
Thhalv10009489m.g
N
0.767
AMTR_s00022p00243980
Amborella trichopoda
AMTR_s00022p00243980
N
0.764
WIP2
Arabidopsis thaliana
AT3G57670
N
0.764
Bo4g111000
Brassica oleracea
Bo4g111000
N
0.764
Bo6g073120
Brassica oleracea
Bo6g073120
N
0.764
Bo8g092070
Brassica oleracea
Bo8g092070
N
0.764
Bra003295
Brassica rapa
Bra003295
N
0.764
Bra014612
Brassica rapa
Bra014612
N
0.764
NTT
Arabidopsis lyrata
fgenesh2_kg.5__2209__AT3G57670.1
N
0.764
GLYMA02G31270
Glycine max
GLYMA02G31270
N
0.764
GLYMA19G32430
Glycine max
GLYMA19G32430
N
0.764
GSMUA_Achr3G03850_001
Musa acuminata
GSMUA_Achr3G03850_001
N
0.764
GSMUA_AchrUn_randomG20320_001
Musa acuminata
GSMUA_AchrUn_randomG20320_001
N
0.764
PGSC0003DMG400007112
Solanum tuberosum
PGSC0003DMG400007112
N
0.764
PGSC0003DMG400030271
Solanum tuberosum
PGSC0003DMG400030271
N
0.764
PGSC0003DMG400046144
Solanum tuberosum
PGSC0003DMG400046144
N
0.764
POPTR_0001s27490
Populus trichocarpa
POPTR_0001s27490
N
0.764
POPTR_0009s06700
Populus trichocarpa
POPTR_0009s06700
N
0.764
POPTR_0016s05310
Populus trichocarpa
POPTR_0016s05310
N
0.764
PRUPE_ppa008185mg
Prunus persica
PRUPE_ppa008185mg
N
0.764
Solyc05g009770.1
Solanum lycopersicum
Solyc05g009770.1
N
0.764
TCM_005892
Theobroma cacao
TCM_005892
N
0.764
TCM_024788
Theobroma cacao
TCM_024788
N
0.764
NTT
Vitis vinifera
VIT_08s0007g08070
N
0.764
Ca_07269
Cicer arietinum
Ca_07269
N
0.764
Cla008187
Citrullus lanatus
Cla008187
N
0.764
Pm025853
Prunus mume
Pm025853
N
0.764
27810.m000651
Ricinus communis
27810.m000651
N
0.764
cassava35956.valid.m1
Manihot esculenta
cassava35956.valid.m1
N
0.764
cassava39829.m1
Manihot esculenta
cassava39829.m1
N
0.764
cassava41737.m1
Manihot esculenta
cassava41737.m1
N
0.764
Cucsa.242970
Cucumis sativus
Cucsa.242970
N
0.764
Cucsa.357260
Cucumis sativus
Cucsa.357260
N
0.764
Aquca_004_00109
Aquilegia coerulea
Aquca_004_00109
N
0.764
Aquca_006_00227
Aquilegia coerulea
Aquca_006_00227
N
0.764
Aquca_040_00077
Aquilegia coerulea
Aquca_040_00077
N
0.764
Bostr.20903s0019
Boechera stricta
Bostr.20903s0019
N
0.764
Cagra.0210s0004
Capsella grandiflora
Cagra.0210s0004
N
0.764
Carubv10017428m.g
Capsella rubella
Carubv10017428m.g
N
0.764
Ciclev10005189m.g
Citrus clementina
Ciclev10005189m.g
N
0.764
Eucgr.A02400
Eucalyptus grandis
Eucgr.A02400
N
0.764
evm.TU.supercontig_84.74
Carica papaya
evm.TU.supercontig_84.74
N
0.764
gene03867-v1.0-hybrid
Fragaria vesca
gene03867-v1.0-hybrid
N
0.764
gene14361-v1.0-hybrid
Fragaria vesca
gene14361-v1.0-hybrid
N
0.764
Gorai.002G152600
Gossypium raimondii
Gorai.002G152600
N
0.764
Gorai.003G089200
Gossypium raimondii
Gorai.003G089200
N
0.764
Gorai.004G037000
Gossypium raimondii
Gorai.004G037000
N
0.764
Gorai.004G065400
Gossypium raimondii
Gorai.004G065400
N
0.764
Gorai.007G177300
Gossypium raimondii
Gorai.007G177300
N
0.764
MDP0000601705
Malus domestica
MDP0000601705
N
0.764
orange1.1g040794m.g
Citrus sinensis
orange1.1g040794m.g
N
0.764
SapurV1A.0018s0090
Salix purpurea
SapurV1A.0018s0090
N
0.764
Thhalv10006035m.g
Eutrema salsugineum
Thhalv10006035m.g
N
0.764
PK03705.1
Cannabis sativa
PK03705.1
N
0.764
chr1.CM0318.720.nd
Lotus japonicus
chr1.CM0318.720.nd
N
0.764
Bra007346
Brassica rapa
Bra007346
N
0.762
BRADI4G33557
Brachypodium distachyon
BRADI4G33557
N
0.761
F775_14972
Aegilops tauschii
F775_14972
N
0.761
GRMZM2G084014
Zea mays
GRMZM2G084014
N
0.761
MLOC_2787
Hordeum vulgare
MLOC_2787
N
0.761
Sb02g028220
Sorghum bicolor
Sb02g028220
N
0.761
Si029897m.g
Setaria italica
Si029897m.g
N
0.761
Traes_5BL_6888AE9CB
Triticum aestivum
Traes_5BL_6888AE9CB
N
0.761
Traes_5DL_51643AC9F
Triticum aestivum
Traes_5DL_51643AC9F
N
0.761
Traes_7AS_8054DC45D
Triticum aestivum
Traes_7AS_8054DC45D
N
0.761
TRIUR3_30490
Triticum urartu
TRIUR3_30490
N
0.761
Pavir.Ba01731
Panicum virgatum
Pavir.Ba01731
N
0.761
GLYMA08G16390
Glycine max
GLYMA08G16390
N
0.758
GLYMA11G19060
Glycine max
GLYMA11G19060
N
0.758
GLYMA12G09400
Glycine max
GLYMA12G09400
N
0.758
GLYMA12G30930
Glycine max
GLYMA12G30930
N
0.758
GLYMA12G36660
Glycine max
GLYMA12G36660
N
0.758
GLYMA13G27371
Glycine max
GLYMA13G27371
N
0.758
GLYMA13G39370
Glycine max
GLYMA13G39370
N
0.758
GLYMA15G42870
Glycine max
GLYMA15G42870
N
0.758
GSMUA_Achr6G01410_001
Musa acuminata
GSMUA_Achr6G01410_001
N
0.758
GSMUA_Achr9G12600_001
Musa acuminata
GSMUA_Achr9G12600_001
N
0.758
GSMUA_AchrUn_randomG22660_001
Musa acuminata
GSMUA_AchrUn_randomG22660_001
N
0.758
PGSC0003DMG400013609
Solanum tuberosum
PGSC0003DMG400013609
N
0.758
POPTR_0004s19460
Populus trichocarpa
POPTR_0004s19460
N
0.758
POPTR_0009s14590
Populus trichocarpa
POPTR_0009s14590
N
0.758
PRUPE_ppa023619mg
Prunus persica
PRUPE_ppa023619mg
N
0.758
PRUPE_ppa024429mg
Prunus persica
PRUPE_ppa024429mg
N
0.758
Solyc11g062060.1
Solanum lycopersicum
Solyc11g062060.1
N
0.758
TCM_041441
Theobroma cacao
TCM_041441
N
0.758
WIP3
Vitis vinifera
VIT_06s0080g00270
N
0.758
Ca_07051
Cicer arietinum
Ca_07051
N
0.758
Cla008675
Citrullus lanatus
Cla008675
N
0.758
Cla015481
Citrullus lanatus
Cla015481
N
0.758
Pm000471
Prunus mume
Pm000471
N
0.758
Pm001374
Prunus mume
Pm001374
N
0.758
30055.m001542
Ricinus communis
30055.m001542
N
0.758
30061.m000294
Ricinus communis
30061.m000294
N
0.758
cassava13451.valid.m1
Manihot esculenta
cassava13451.valid.m1
N
0.758
cassava16214.m1
Manihot esculenta
cassava16214.m1
N
0.758
Cucsa.050260
Cucumis sativus
Cucsa.050260
N
0.758
Cucsa.065460
Cucumis sativus
Cucsa.065460
N
0.758
mgf019910m
Mimulus guttatus
mgf019910m
N
0.758
mgf022319m
Mimulus guttatus
mgf022319m
N
0.758
Ciclev10017716m.g
Citrus clementina
Ciclev10017716m.g
N
0.758
Ciclev10028757m.g
Citrus clementina
Ciclev10028757m.g
N
0.758
Eucgr.B03870
Eucalyptus grandis
Eucgr.B03870
N
0.758
evm.TU.contig_35924
Carica papaya
evm.TU.contig_35924
N
0.758
gene20598-v1.0-hybrid
Fragaria vesca
gene20598-v1.0-hybrid
N
0.758
gene22042-v1.0-hybrid
Fragaria vesca
gene22042-v1.0-hybrid
N
0.758
Gorai.001G121700
Gossypium raimondii
Gorai.001G121700
N
0.758
Gorai.006G111400
Gossypium raimondii
Gorai.006G111400
N
0.758
Gorai.006G138700
Gossypium raimondii
Gorai.006G138700
N
0.758
Lus10004887.g
Linum usitatissimum
Lus10004887.g
N
0.758
Lus10020597.g
Linum usitatissimum
Lus10020597.g
N
0.758
Lus10031271.g
Linum usitatissimum
Lus10031271.g
N
0.758
Lus10031838.g
Linum usitatissimum
Lus10031838.g
N
0.758
MDP0000131949
Malus domestica
MDP0000131949
N
0.758
MDP0000300013
Malus domestica
MDP0000300013
N
0.758
MDP0000403797
Malus domestica
MDP0000403797
N
0.758
MDP0000580545
Malus domestica
MDP0000580545
N
0.758
orange1.1g019587m.g
Citrus sinensis
orange1.1g019587m.g
N
0.758
orange1.1g039549m.g
Citrus sinensis
orange1.1g039549m.g
N
0.758
SapurV1A.0080s0360
Salix purpurea
SapurV1A.0080s0360
N
0.758
SapurV1A.0219s0040
Salix purpurea
SapurV1A.0219s0040
N
0.758
Sb09g021850
Sorghum bicolor
Sb09g021850
N
0.756
Si022296m.g
Setaria italica
Si022296m.g
N
0.756
Pavir.J11927
Panicum virgatum
Pavir.J11927
N
0.756