VIT_06s0004g01870 (Vitis vinifera)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 VIT_06s0004g01870 T131455_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_06s0004g01870.t01 C2H2 ZF 256 277
VIT_06s0004g01870.t01 C2H2 ZF 278 305

Links

Other C2H2 ZF family TFs
Other Vitis vinifera TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.817
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.817
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.817
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.817
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.817
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.817
OB06G28740 Oryza brachyantha OB06G28740 N 0.817
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.817
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.817
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.817
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.817
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.817
OS06G0612300 Oryza sativa OS06G0612300 N 0.817
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.817
Si006616m.g Setaria italica Si006616m.g N 0.817
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.817
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.797
WIP2 Arabidopsis thaliana AT3G57670 N 0.797
Bo4g111000 Brassica oleracea Bo4g111000 N 0.797
Bo6g073120 Brassica oleracea Bo6g073120 N 0.797
Bo8g092070 Brassica oleracea Bo8g092070 N 0.797
Bra003295 Brassica rapa Bra003295 N 0.797
Bra014612 Brassica rapa Bra014612 N 0.797
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.797
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.797
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.797
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.797
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.797
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.797
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.797
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.797
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.797
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.797
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.797
TCM_024788 Theobroma cacao TCM_024788 N 0.797
NTT Vitis vinifera VIT_08s0007g08070 N 0.797
Ca_07269 Cicer arietinum Ca_07269 N 0.797
Cla008187 Citrullus lanatus Cla008187 N 0.797
Pm000471 Prunus mume Pm000471 N 0.797
Pm025853 Prunus mume Pm025853 N 0.797
27810.m000651 Ricinus communis 27810.m000651 N 0.797
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.797
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.797
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.797
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.797
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.797
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.797
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.797
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.797
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.797
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.797
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.797
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.797
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.797
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.797
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.797
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.797
MDP0000403797 Malus domestica MDP0000403797 N 0.797
MDP0000580545 Malus domestica MDP0000580545 N 0.797
MDP0000601705 Malus domestica MDP0000601705 N 0.797
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.797
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.797
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.797
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.797
PK03705.1 Cannabis sativa PK03705.1 N 0.797
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.797
Bra007346 Brassica rapa Bra007346 N 0.795
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.793
OBART06G20890 Oryza barthii OBART06G20890 N 0.793
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.793
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.793
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.788
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.788
30169.m006417 Ricinus communis 30169.m006417 N 0.788
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.788
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.788
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.787
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.787
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.787
TCM_040610 Theobroma cacao TCM_040610 N 0.787
Ca_21713 Cicer arietinum Ca_21713 N 0.787
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.787
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.787
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.787
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.787
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.782
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.778
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.778
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.773
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.773
Cla008675 Citrullus lanatus Cla008675 N 0.773
mgf019910m Mimulus guttatus mgf019910m N 0.773
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.767
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.767
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.767
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.767
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.767
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.767
OS02G0196100 Oryza sativa OS02G0196100 N 0.767
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.767
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.767
TCM_005892 Theobroma cacao TCM_005892 N 0.767
30061.m000294 Ricinus communis 30061.m000294 N 0.767
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.767
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.764
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.763
WIP6 Arabidopsis thaliana AT1G13290 N 0.763
Bo5g015200 Brassica oleracea Bo5g015200 N 0.763
Bra019822 Brassica rapa Bra019822 N 0.763
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.763
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.763
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.763
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.763
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.763
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.763
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.763
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.763
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.763
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.763
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.763
TCM_011858 Theobroma cacao TCM_011858 N 0.763
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.763
Ca_08435 Cicer arietinum Ca_08435 N 0.763
Ca_24699 Cicer arietinum Ca_24699 N 0.763
Cla002714 Citrullus lanatus Cla002714 N 0.763
Pm029018 Prunus mume Pm029018 N 0.763
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.763
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.763
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.763
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.763
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.763
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.763
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.763
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.763
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.763
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.763
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.763
MDP0000303483 Malus domestica MDP0000303483 N 0.763
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.763
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.763
TT1 Vitis vinifera VIT_18s0001g05860 N 0.760
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.758
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.758
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.758
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.758
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.758
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.756
OBART09G03640 Oryza barthii OBART09G03640 N 0.756
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.756
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.756
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.756
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.756
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.756
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.756
MDP0000144266 Malus domestica MDP0000144266 N 0.756