Z518_03222 (Rhinocladiella mackenziei)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 Z518_03222 T388755_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nit-4
M01430_2.00 		Neurospora crassa
NTCCGCGGVN
NBCCGCGGAN		 PBM
Lambert et al.(2019)
pTH8909 		0.652 0.821
nirA
M01350_2.00 		Aspergillus nidulans
SYNCGGANNH
DNNTCCGNRS		 PBM
Lambert et al.(2019)
pEX0399 		0.598 0.795
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIX08566 Zinc cluster 49 89

Links

Other Zinc cluster family TFs
Other Rhinocladiella mackenziei TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00017p00206510 Amborella trichopoda AMTR_s00017p00206510 N
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N
IGS.gm_9_00317 Chlorella NC64A IGS.gm_9_00317 N
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N
fgenesh1_pg.1_#_433 Coccomyxa subellipsoidea C169 fgenesh1_pg.1_#_433 N
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N
mgf001526m Mimulus guttatus mgf001526m N
mgf014458m Mimulus guttatus mgf014458m N
mgf015980m Mimulus guttatus mgf015980m I
Pavir.J33349 Panicum virgatum Pavir.J33349 N
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N
Pavir.J33226 Panicum virgatum Pavir.J33226 N
estExt_gwp_gw1.C_410063 Physcomitrella patens estExt_gwp_gw1.C_410063 N
estExt_gwp_gw1.C_640002 Physcomitrella patens estExt_gwp_gw1.C_640002 N
gw1.103.78.1 Physcomitrella patens gw1.103.78.1 N
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I
Sb04g001720 Sorghum bicolor Sb04g001720 N
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I
estExt_Genewise1Plus.C_10818 Volvox carteri estExt_Genewise1Plus.C_10818 N
GRMZM2G389768 Zea mays GRMZM2G389768 N