MTR_6g029180 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_6g029180 T002907_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.737 0.878
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.737 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES75163 AP2 31 82

Links

Other AP2 family TFs
Other Medicago truncatula TFs

205 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.738
TCM_025913 Theobroma cacao TCM_025913 I 0.738
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.738
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.738
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.738
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.738
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.738
Cla012318 Citrullus lanatus Cla012318 I 0.738
Pm025326 Prunus mume Pm025326 I 0.738
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.738
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.738
MDP0000177547 Malus domestica MDP0000177547 I 0.738
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.738
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.738
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.738
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.738
Ca_08232 Cicer arietinum Ca_08232 I 0.738
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.737
Bra020063 Brassica rapa Bra020063 I 0.737
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.737
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.737
OS07G0204000 Oryza sativa OS07G0204000 I 0.737
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.737
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.737
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.737
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.737
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.737
Bra006518 Brassica rapa Bra006518 I 0.737
TCM_040015 Theobroma cacao TCM_040015 I 0.737
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.737
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.737
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.737
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.737
Bo2g018360 Brassica oleracea Bo2g018360 I 0.737
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.737
Bra002262 Brassica rapa Bra002262 I 0.737
Bo9g152440 Brassica oleracea Bo9g152440 I 0.737
Bo3g013830 Brassica oleracea Bo3g013830 I 0.737
30084.m000185 Ricinus communis 30084.m000185 I 0.737
OBART07G06690 Oryza barthii OBART07G06690 I 0.737
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.737
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.737
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.737
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.737
OB07G15030 Oryza brachyantha OB07G15030 I 0.737
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.737
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.736
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.735
mgf022665m Mimulus guttatus mgf022665m I 0.735
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.734
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.734
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.734
Si033237m.g Setaria italica Si033237m.g I 0.734
Pm000004 Prunus mume Pm000004 I 0.733
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.733
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.733
MDP0000525933 Malus domestica MDP0000525933 I 0.733
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.732
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.731
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.730
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.729
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.728
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.728
Ca_25424 Cicer arietinum Ca_25424 I 0.725
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.724
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.724
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.723
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.723
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.722
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.718
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.718
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.718
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.718
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.718
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.718
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.718
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.718
Si024417m.g Setaria italica Si024417m.g I 0.718
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.718
Cla010474 Citrullus lanatus Cla010474 I 0.718
TCM_018659 Theobroma cacao TCM_018659 I 0.715
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.715
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.715
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.715
PK13330.1 Cannabis sativa PK13330.1 I 0.715
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.715
29635.m000461 Ricinus communis 29635.m000461 I 0.715
Pm015931 Prunus mume Pm015931 I 0.715
Ca_10494 Cicer arietinum Ca_10494 I 0.715
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.715
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.715
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.715
MDP0000551969 Malus domestica MDP0000551969 I 0.715
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.715
F775_02727 Aegilops tauschii F775_02727 I 0.715
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.715
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.715
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.715
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.715
OS12G0582900 Oryza sativa OS12G0582900 I 0.715
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.715
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.715
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.715
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.715
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.715
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.715
Si038848m.g Setaria italica Si038848m.g I 0.715
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.715
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.715
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.715
MDP0000276536 Malus domestica MDP0000276536 I 0.715
OBART12G17080 Oryza barthii OBART12G17080 I 0.715
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.715
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.715
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.715
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.715
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.715
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.713
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.713
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.713
29813.m001543 Ricinus communis 29813.m001543 I 0.713
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.713
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.712
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.711
TCM_011632 Theobroma cacao TCM_011632 I 0.710
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.710
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.710
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.710
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.709
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.709
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.708
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.706
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.705
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.705
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.703
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.703
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.703
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.701
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.701
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.700
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.700
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.700
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.700
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.700
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.700
MDP0000133476 Malus domestica MDP0000133476 I 0.700
MDP0000138669 Malus domestica MDP0000138669 I 0.700
Pm008788 Prunus mume Pm008788 I 0.700
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.700
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.700
Cla021590 Citrullus lanatus Cla021590 I 0.700
TCM_005425 Theobroma cacao TCM_005425 I 0.700
mgf018851m Mimulus guttatus mgf018851m I 0.700
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.700
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.700
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.700
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.699
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.699
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.699
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.698
POPTR_0019s05170 Populus trichocarpa POPTR_0019s05170 I 0.697
Ca_16397 Cicer arietinum Ca_16397 I 0.697
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.697
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.697
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.697
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.697
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.697
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.697
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.697
30174.m008961 Ricinus communis 30174.m008961 I 0.696
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.695
Si032213m.g Setaria italica Si032213m.g I 0.694
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.694
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.694
PK25269.1 Cannabis sativa PK25269.1 I 0.694
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.694
TCM_015579 Theobroma cacao TCM_015579 I 0.694
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.694
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.694
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.694
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.694
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.693
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.692
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.691
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.691
mgf023693m Mimulus guttatus mgf023693m I 0.691
mgf022810m Mimulus guttatus mgf022810m I 0.691
30174.m009031 Ricinus communis 30174.m009031 I 0.691
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.690
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.689
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.688
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.688
MDP0000128326 Malus domestica MDP0000128326 I 0.688
30068.m002623 Ricinus communis 30068.m002623 I 0.687
OB09G23520 Oryza brachyantha OB09G23520 I 0.687
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.684
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.684
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.684
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.684
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.683
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.682
SapurV1A.0598s0020 Salix purpurea SapurV1A.0598s0020 I 0.682
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.681
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.681
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.679