VAL1 (Arabidopsis thaliana)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 AT2G30470 T018419_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50##M ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G30470.1 B3 295 396

Links

Other B3 family TFs
Other Arabidopsis thaliana TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HSI2 Arabidopsis lyrata scaffold_401535.1 N 0.990
Carubv10022654m.g Capsella rubella Carubv10022654m.g N 0.980
Bostr.24513s0191 Boechera stricta Bostr.24513s0191 N 0.980
Cagra.0567s0011 Capsella grandiflora Cagra.0567s0011 N 0.980
Bra022801 Brassica rapa Bra022801 N 0.970
Bo3g024640 Brassica oleracea Bo3g024640 N 0.970
Thhalv10016263m.g Eutrema salsugineum Thhalv10016263m.g N 0.970
Bra021635 Brassica rapa Bra021635 N 0.970
Bo4g173060 Brassica oleracea Bo4g173060 N 0.949
Bo4g058460 Brassica oleracea Bo4g058460 N 0.939
Bra018313 Brassica rapa Bra018313 N 0.939
PK09020.1 Cannabis sativa PK09020.1 N 0.898
Gorai.003G152700 Gossypium raimondii Gorai.003G152700 N 0.889
POPTR_0019s15070 Populus trichocarpa POPTR_0019s15070 N 0.879
PK13763.1 Cannabis sativa PK13763.1 N 0.879
TCM_042290 Theobroma cacao TCM_042290 N 0.879
Pm000247 Prunus mume Pm000247 N 0.869
Lus10025226.g Linum usitatissimum Lus10025226.g N 0.869
gene13877-v1.0-hybrid Fragaria vesca gene13877-v1.0-hybrid N 0.869
MTR_4g028130 Medicago truncatula MTR_4g028130 N 0.869
TCM_019701 Theobroma cacao TCM_019701 N 0.869
Pm003031 Prunus mume Pm003031 N 0.869
SapurV1A.0215s0260 Salix purpurea SapurV1A.0215s0260 N 0.869
GLYMA03G04330 Glycine max GLYMA03G04330 N 0.869
PRUPE_ppa001229mg Prunus persica PRUPE_ppa001229mg N 0.869
Ca_23185 Cicer arietinum Ca_23185 N 0.869
cassava13133.valid.m1 Manihot esculenta cassava13133.valid.m1 N 0.869
GLYMA01G32810 Glycine max GLYMA01G32810 N 0.869
PRUPE_ppa001234mg Prunus persica PRUPE_ppa001234mg N 0.869
gene28098-v1.0-hybrid Fragaria vesca gene28098-v1.0-hybrid N 0.859
Solyc10g075030.1 Solanum lycopersicum Solyc10g075030.1 N 0.859
Eucgr.F02704 Eucalyptus grandis Eucgr.F02704 N 0.859
mgf007363m Mimulus guttatus mgf007363m N 0.859
Ciclev10011039m.g Citrus clementina Ciclev10011039m.g N 0.859
Cla008225 Citrullus lanatus Cla008225 N 0.859
29915.m000469 Ricinus communis 29915.m000469 N 0.859
MDP0000267885 Malus domestica MDP0000267885 N 0.859
GLYMA11G31234 Glycine max GLYMA11G31234 N 0.859
POPTR_0016s14350 Populus trichocarpa POPTR_0016s14350 N 0.859
Pavir.Bb03074 Panicum virgatum Pavir.Bb03074 N 0.859
SapurV1A.0065s0470 Salix purpurea SapurV1A.0065s0470 N 0.859
Sb02g043000 Sorghum bicolor Sb02g043000 N 0.859
SapurV1A.0914s0080 Salix purpurea SapurV1A.0914s0080 N 0.859
orange1.1g002708m.g Citrus sinensis orange1.1g002708m.g N 0.859
GLYMA18G05840 Glycine max GLYMA18G05840 N 0.859
MDP0000229344 Malus domestica MDP0000229344 N 0.859
MDP0000127640 Malus domestica MDP0000127640 N 0.859
HSL1 Vitis vinifera VIT_08s0058g01300 N 0.859
POPTR_0006s10880 Populus trichocarpa POPTR_0006s10880 N 0.859
GRMZM2G172621 Zea mays GRMZM2G172621 N 0.859
GRMZM2G158162 Zea mays GRMZM2G158162 N 0.859
29976.m000497 Ricinus communis 29976.m000497 N 0.859
Cla018330 Citrullus lanatus Cla018330 N 0.848
POPTR_0013s15330 Populus trichocarpa POPTR_0013s15330 N 0.848
Ca_08924 Cicer arietinum Ca_08924 N 0.848
Gorai.005G004300 Gossypium raimondii Gorai.005G004300 N 0.848
Bra023968 Brassica rapa Bra023968 N 0.848
Pavir.Bb03754 Panicum virgatum Pavir.Bb03754 N 0.848
Si028829m.g Setaria italica Si028829m.g N 0.848
Si028834m.g Setaria italica Si028834m.g N 0.848
Bo7g115570 Brassica oleracea Bo7g115570 N 0.848
Thhalv10024481m.g Eutrema salsugineum Thhalv10024481m.g N 0.848
Bo7g115560 Brassica oleracea Bo7g115560 N 0.848
Pavir.Ba00225 Panicum virgatum Pavir.Ba00225 N 0.848
Lus10025142.g Linum usitatissimum Lus10025142.g N 0.848
Ciclev10000225m.g Citrus clementina Ciclev10000225m.g N 0.848
Bostr.7867s1055 Boechera stricta Bostr.7867s1055 N 0.848
Cucsa.177010 Cucumis sativus Cucsa.177010 N 0.848
cassava25238.valid.m1 Manihot esculenta cassava25238.valid.m1 N 0.848
evm.TU.supercontig_0.91 Carica papaya evm.TU.supercontig_0.91 N 0.848
Gorai.011G127500 Gossypium raimondii Gorai.011G127500 N 0.848
AMTR_s00003p00266720 Amborella trichopoda AMTR_s00003p00266720 N 0.848
Lus10022741.g Linum usitatissimum Lus10022741.g N 0.848
Traes_2AS_F4CEC9849 Triticum aestivum Traes_2AS_F4CEC9849 N 0.838
evm.TU.supercontig_2.296 Carica papaya evm.TU.supercontig_2.296 N 0.838
Pavir.Ba00654 Panicum virgatum Pavir.Ba00654 N 0.838
SapurV1A.1353s0040 Salix purpurea SapurV1A.1353s0040 N 0.838
Solyc06g082520.2 Solanum lycopersicum Solyc06g082520.2 N 0.838
Eucgr.B04027 Eucalyptus grandis Eucgr.B04027 N 0.838
TRIUR3_04238 Triticum urartu TRIUR3_04238 N 0.838
Traes_2DS_B1C947D2B Triticum aestivum Traes_2DS_B1C947D2B N 0.838
Traes_2BS_5B00A8C50 Triticum aestivum Traes_2BS_5B00A8C50 N 0.838
BRADI1G17680 Brachypodium distachyon BRADI1G17680 N 0.838
OLONG_008212 Oryza longistaminata OLONG_008212 N 0.838
BGIOSGA023709 Oryza indica BGIOSGA023709 N 0.838
OS07G0679700 Oryza sativa OS07G0679700 N 0.838
ORUFI07G27410 Oryza rufipogon ORUFI07G27410 N 0.838
ONIVA07G26110 Oryza nivara ONIVA07G26110 N 0.838
ORGLA07G0207500 Oryza glaberrima ORGLA07G0207500 N 0.838
OMERI07G23020 Oryza meridionalis OMERI07G23020 N 0.838
Sb02g036430 Sorghum bicolor Sb02g036430 N 0.838
OGLUM07G26430 Oryza glumaepatula OGLUM07G26430 N 0.838
OBART07G26400 Oryza barthii OBART07G26400 N 0.838
LPERR07G23240 Leersia perrieri LPERR07G23240 N 0.838
GRMZM2G008356 Zea mays GRMZM2G008356 N 0.838
F775_32613 Aegilops tauschii F775_32613 N 0.838
OB07G31850 Oryza brachyantha OB07G31850 N 0.838
GSMUA_Achr4G23790_001 Musa acuminata GSMUA_Achr4G23790_001 N 0.828
ONIVA07G17160 Oryza nivara ONIVA07G17160 N 0.828
OGLUM07G18530 Oryza glumaepatula OGLUM07G18530 N 0.828
OPUNC07G17640 Oryza punctata OPUNC07G17640 N 0.828
GSMUA_Achr5G27930_001 Musa acuminata GSMUA_Achr5G27930_001 N 0.828
LPERR07G16110 Leersia perrieri LPERR07G16110 N 0.828
OMERI07G15550 Oryza meridionalis OMERI07G15550 N 0.828
BRADI1G24720 Brachypodium distachyon BRADI1G24720 N 0.828
OBART07G18780 Oryza barthii OBART07G18780 N 0.828
BGIOSGA025947 Oryza indica BGIOSGA025947 N 0.828
OLONG_013183 Oryza longistaminata OLONG_013183 N 0.828
Aquca_008_00005 Aquilegia coerulea Aquca_008_00005 N 0.828
VIT_06s0004g08100 Vitis vinifera VIT_06s0004g08100 N 0.828
SELMODRAFT_451626 Selaginella moellendorffii SELMODRAFT_451626 N 0.828
ORUFI07G19520 Oryza rufipogon ORUFI07G19520 N 0.828
SELMODRAFT_451631 Selaginella moellendorffii SELMODRAFT_451631 N 0.828
ORGLA07G0151800 Oryza glaberrima ORGLA07G0151800 N 0.828
PDK_20s13009463g004 Phoenix dactylifera PDK_20s13009463g004 N 0.828
Solyc02g079020.2 Solanum lycopersicum Solyc02g079020.2 N 0.818
Traes_2BS_A61094919 Triticum aestivum Traes_2BS_A61094919 N 0.818
PRUPE_ppa001220mg Prunus persica PRUPE_ppa001220mg N 0.818
MTR_3g467380 Medicago truncatula MTR_3g467380 N 0.818
VAL3 Vitis vinifera VIT_00s0181g00260 N 0.818
Traes_2AS_C4FD8E351 Triticum aestivum Traes_2AS_C4FD8E351 N 0.818
GSMUA_Achr8G01750_001 Musa acuminata GSMUA_Achr8G01750_001 N 0.818
GSMUA_Achr7G00120_001 Musa acuminata GSMUA_Achr7G00120_001 N 0.818
PDK_20s13009466g004 Phoenix dactylifera PDK_20s13009466g004 N 0.818
Gorai.011G022400 Gossypium raimondii Gorai.011G022400 N 0.818
TCM_029976 Theobroma cacao TCM_029976 N 0.818
MLOC_4657 Hordeum vulgare MLOC_4657 N 0.818
Traes_2DS_3E4E3BEFC Triticum aestivum Traes_2DS_3E4E3BEFC N 0.818
Pm009906 Prunus mume Pm009906 N 0.818
mgf007846m Mimulus guttatus mgf007846m N 0.818
Aquca_063_00016 Aquilegia coerulea Aquca_063_00016 N 0.818
LjSGA_009543.1 Lotus japonicus LjSGA_009543.1 N 0.818
PK04158.1 Cannabis sativa PK04158.1 N 0.818
Cucsa.045980 Cucumis sativus Cucsa.045980 N 0.818
SapurV1A.0044s0150 Salix purpurea SapurV1A.0044s0150 N 0.808
orange1.1g002489m.g Citrus sinensis orange1.1g002489m.g N 0.808
GSMUA_Achr8G03800_001 Musa acuminata GSMUA_Achr8G03800_001 N 0.808
GLYMA13G31970 Glycine max GLYMA13G31970 N 0.808
Lus10018440.g Linum usitatissimum Lus10018440.g N 0.808
mgf013365m Mimulus guttatus mgf013365m N 0.808
MTR_2g011940 Medicago truncatula MTR_2g011940 N 0.808
SapurV1A.0028s0060 Salix purpurea SapurV1A.0028s0060 N 0.808
GLYMA15G07350 Glycine max GLYMA15G07350 N 0.808
Ciclev10014219m.g Citrus clementina Ciclev10014219m.g N 0.808
MLOC_36861 Hordeum vulgare MLOC_36861 N 0.802
LjSGA_029833.1 Lotus japonicus LjSGA_029833.1 N 0.800
POPTR_0011s04340 Populus trichocarpa POPTR_0011s04340 N 0.798
GLYMA02G40280 Glycine max GLYMA02G40280 N 0.798
cassava41301.m1 Manihot esculenta cassava41301.m1 N 0.798
POPTR_0004s03530 Populus trichocarpa POPTR_0004s03530 N 0.798
29917.m001969 Ricinus communis 29917.m001969 N 0.798
cassava39646.m1 Manihot esculenta cassava39646.m1 N 0.798
GLYMA14G38492 Glycine max GLYMA14G38492 N 0.798
Eucgr.L01473 Eucalyptus grandis Eucgr.L01473 N 0.798
Gorai.009G173100 Gossypium raimondii Gorai.009G173100 N 0.798
gene30690-v1.0-hybrid Fragaria vesca gene30690-v1.0-hybrid N 0.796
OS07G0563350 Oryza sativa OS07G0563350 N 0.795
Bostr.10689s0100 Boechera stricta Bostr.10689s0100 N 0.788
VAL2 Arabidopsis thaliana AT4G32010 N 0.784
Carubv10004194m.g Capsella rubella Carubv10004194m.g N 0.784
Cagra.12385s0007 Capsella grandiflora Cagra.12385s0007 N 0.784
HSL1 Arabidopsis lyrata scaffold_700997.1 N 0.784
Cucsa.111990 Cucumis sativus Cucsa.111990 N 0.783
mgf024907m Mimulus guttatus mgf024907m N 0.768
Eucgr.E03465 Eucalyptus grandis Eucgr.E03465 N 0.768
Aquca_045_00208 Aquilegia coerulea Aquca_045_00208 N 0.758
PDK_20s1314471g001 Phoenix dactylifera PDK_20s1314471g001 N 0.750
Thhalv10024526m.g Eutrema salsugineum Thhalv10024526m.g N 0.747
Carubv10004192m.g Capsella rubella Carubv10004192m.g N 0.747
Bra013535 Brassica rapa Bra013535 N 0.747
MTR_5g075410 Medicago truncatula MTR_5g075410 N 0.742
Ca_00244 Cicer arietinum Ca_00244 N 0.740
SELMODRAFT_451635 Selaginella moellendorffii SELMODRAFT_451635 N 0.737
Cagra.3519s0007 Capsella grandiflora Cagra.3519s0007 N 0.737
SELMODRAFT_451634 Selaginella moellendorffii SELMODRAFT_451634 N 0.737
Ca_15659 Cicer arietinum Ca_15659 N 0.737
OPUNC07G24850 Oryza punctata OPUNC07G24850 N 0.737
Bo1g024250 Brassica oleracea Bo1g024250 N 0.737
F775_30051 Aegilops tauschii F775_30051 N 0.708