orange1.1g002489m.g (Citrus sinensis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 orange1.1g002489m.g T023715_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g002489m B3 367 468
orange1.1g002554m B3 359 460
orange1.1g002626m B3 359 441
orange1.1g002739m B3 337 438
orange1.1g003322m B3 281 382
orange1.1g003324m B3 281 382
orange1.1g005562m B3 142 243
orange1.1g005563m B3 142 243
orange1.1g005945m B3 119 220
orange1.1g006267m B3 359 460
orange1.1g007837m B3 359 460
orange1.1g007867m B3 359 460
orange1.1g007900m B3 359 460
orange1.1g008273m B3 359 460
orange1.1g008961m B3 1 99
orange1.1g009504m B3 2 85
orange1.1g012348m B3 359 441

Links

Other B3 family TFs
Other Citrus sinensis TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10014219m.g Citrus clementina Ciclev10014219m.g N 1.000
POPTR_0011s04340 Populus trichocarpa POPTR_0011s04340 N 0.990
POPTR_0004s03530 Populus trichocarpa POPTR_0004s03530 N 0.980
PRUPE_ppa001220mg Prunus persica PRUPE_ppa001220mg N 0.980
Pm009906 Prunus mume Pm009906 N 0.980
Gorai.011G022400 Gossypium raimondii Gorai.011G022400 N 0.980
SapurV1A.0044s0150 Salix purpurea SapurV1A.0044s0150 N 0.980
PK04158.1 Cannabis sativa PK04158.1 N 0.980
TCM_029976 Theobroma cacao TCM_029976 N 0.975
MDP0000274788 Malus domestica MDP0000274788 N 0.975
cassava39646.m1 Manihot esculenta cassava39646.m1 N 0.970
cassava41301.m1 Manihot esculenta cassava41301.m1 N 0.970
Cucsa.045980 Cucumis sativus Cucsa.045980 N 0.960
Gorai.009G173100 Gossypium raimondii Gorai.009G173100 N 0.960
SapurV1A.0028s0060 Salix purpurea SapurV1A.0028s0060 N 0.960
VAL3 Vitis vinifera VIT_00s0181g00260 N 0.949
29917.m001969 Ricinus communis 29917.m001969 N 0.949
Eucgr.L01473 Eucalyptus grandis Eucgr.L01473 N 0.949
Eucgr.E03465 Eucalyptus grandis Eucgr.E03465 N 0.948
Pavir.Ba00654 Panicum virgatum Pavir.Ba00654 N 0.938
GRMZM2G008356 Zea mays GRMZM2G008356 N 0.925
Sb02g036430 Sorghum bicolor Sb02g036430 N 0.919
Solyc02g079020.2 Solanum lycopersicum Solyc02g079020.2 N 0.919
PK13763.1 Cannabis sativa PK13763.1 N 0.912
GLYMA13G31970 Glycine max GLYMA13G31970 N 0.909
GLYMA15G07350 Glycine max GLYMA15G07350 N 0.909
GSMUA_Achr8G03800_001 Musa acuminata GSMUA_Achr8G03800_001 N 0.909
Si028829m.g Setaria italica Si028829m.g N 0.909
HSL1 Vitis vinifera VIT_08s0058g01300 N 0.909
Pavir.Bb03074 Panicum virgatum Pavir.Bb03074 N 0.909
Aquca_063_00016 Aquilegia coerulea Aquca_063_00016 N 0.900
BGIOSGA025947 Oryza indica BGIOSGA025947 N 0.899
Bo7g115560 Brassica oleracea Bo7g115560 N 0.899
Bo7g115570 Brassica oleracea Bo7g115570 N 0.899
Bra023968 Brassica rapa Bra023968 N 0.899
BRADI1G24720 Brachypodium distachyon BRADI1G24720 N 0.899
GSMUA_Achr7G00120_001 Musa acuminata GSMUA_Achr7G00120_001 N 0.899
LPERR07G16110 Leersia perrieri LPERR07G16110 N 0.899
MTR_2g011940 Medicago truncatula MTR_2g011940 N 0.899
OBART07G18780 Oryza barthii OBART07G18780 N 0.899
OGLUM07G18530 Oryza glumaepatula OGLUM07G18530 N 0.899
OLONG_013183 Oryza longistaminata OLONG_013183 N 0.899
OMERI07G15550 Oryza meridionalis OMERI07G15550 N 0.899
ONIVA07G17160 Oryza nivara ONIVA07G17160 N 0.899
OPUNC07G17640 Oryza punctata OPUNC07G17640 N 0.899
ORGLA07G0151800 Oryza glaberrima ORGLA07G0151800 N 0.899
ORUFI07G19520 Oryza rufipogon ORUFI07G19520 N 0.899
PRUPE_ppa001234mg Prunus persica PRUPE_ppa001234mg N 0.899
TCM_019701 Theobroma cacao TCM_019701 N 0.899
Pm003031 Prunus mume Pm003031 N 0.899
29915.m000469 Ricinus communis 29915.m000469 N 0.899
Bostr.7867s1055 Boechera stricta Bostr.7867s1055 N 0.899
Ciclev10011039m.g Citrus clementina Ciclev10011039m.g N 0.899
gene13877-v1.0-hybrid Fragaria vesca gene13877-v1.0-hybrid N 0.899
gene30690-v1.0-hybrid Fragaria vesca gene30690-v1.0-hybrid N 0.899
orange1.1g002708m.g Citrus sinensis orange1.1g002708m.g N 0.899
Thhalv10024481m.g Eutrema salsugineum Thhalv10024481m.g N 0.899
AMTR_s00003p00266720 Amborella trichopoda AMTR_s00003p00266720 N 0.889
GLYMA01G32810 Glycine max GLYMA01G32810 N 0.889
GLYMA03G04330 Glycine max GLYMA03G04330 N 0.889
GSMUA_Achr4G23790_001 Musa acuminata GSMUA_Achr4G23790_001 N 0.889
MLOC_4657 Hordeum vulgare MLOC_4657 N 0.889
MTR_4g028130 Medicago truncatula MTR_4g028130 N 0.889
POPTR_0006s10880 Populus trichocarpa POPTR_0006s10880 N 0.889
POPTR_0016s14350 Populus trichocarpa POPTR_0016s14350 N 0.889
Solyc10g075030.1 Solanum lycopersicum Solyc10g075030.1 N 0.889
Traes_2AS_C4FD8E351 Triticum aestivum Traes_2AS_C4FD8E351 N 0.889
Traes_2BS_A61094919 Triticum aestivum Traes_2BS_A61094919 N 0.889
Traes_2DS_3E4E3BEFC Triticum aestivum Traes_2DS_3E4E3BEFC N 0.889
Ca_23185 Cicer arietinum Ca_23185 N 0.889
cassava25238.valid.m1 Manihot esculenta cassava25238.valid.m1 N 0.889
evm.TU.supercontig_0.91 Carica papaya evm.TU.supercontig_0.91 N 0.889
Lus10025226.g Linum usitatissimum Lus10025226.g N 0.889
SapurV1A.0065s0470 Salix purpurea SapurV1A.0065s0470 N 0.889
SapurV1A.0914s0080 Salix purpurea SapurV1A.0914s0080 N 0.889
PDK_20s13009463g004 Phoenix dactylifera PDK_20s13009463g004 N 0.889
Lus10025142.g Linum usitatissimum Lus10025142.g N 0.885
BRADI1G17680 Brachypodium distachyon BRADI1G17680 N 0.879
Cla018330 Citrullus lanatus Cla018330 N 0.879
Cucsa.177010 Cucumis sativus Cucsa.177010 N 0.879
Eucgr.F02704 Eucalyptus grandis Eucgr.F02704 N 0.879
Gorai.005G004300 Gossypium raimondii Gorai.005G004300 N 0.879
Gorai.011G127500 Gossypium raimondii Gorai.011G127500 N 0.879
Lus10018440.g Linum usitatissimum Lus10018440.g N 0.879
Aquca_045_00208 Aquilegia coerulea Aquca_045_00208 N 0.875
BGIOSGA023709 Oryza indica BGIOSGA023709 N 0.869
F775_32613 Aegilops tauschii F775_32613 N 0.869
LPERR07G23240 Leersia perrieri LPERR07G23240 N 0.869
OB07G31850 Oryza brachyantha OB07G31850 N 0.869
OBART07G26400 Oryza barthii OBART07G26400 N 0.869
OGLUM07G26430 Oryza glumaepatula OGLUM07G26430 N 0.869
OLONG_008212 Oryza longistaminata OLONG_008212 N 0.869
OMERI07G23020 Oryza meridionalis OMERI07G23020 N 0.869
ONIVA07G26110 Oryza nivara ONIVA07G26110 N 0.869
ORGLA07G0207500 Oryza glaberrima ORGLA07G0207500 N 0.869
ORUFI07G27410 Oryza rufipogon ORUFI07G27410 N 0.869
OS07G0679700 Oryza sativa OS07G0679700 N 0.869
Traes_2AS_F4CEC9849 Triticum aestivum Traes_2AS_F4CEC9849 N 0.869
Traes_2BS_5B00A8C50 Triticum aestivum Traes_2BS_5B00A8C50 N 0.869
Traes_2DS_B1C947D2B Triticum aestivum Traes_2DS_B1C947D2B N 0.869
TRIUR3_04238 Triticum urartu TRIUR3_04238 N 0.869
mgf007363m Mimulus guttatus mgf007363m N 0.869
PDK_20s13009466g004 Phoenix dactylifera PDK_20s13009466g004 N 0.865
Bo4g173060 Brassica oleracea Bo4g173060 N 0.863
OS07G0563350 Oryza sativa OS07G0563350 N 0.863
mgf007846m Mimulus guttatus mgf007846m N 0.863
PRUPE_ppa001229mg Prunus persica PRUPE_ppa001229mg N 0.859
Si028834m.g Setaria italica Si028834m.g N 0.859
TCM_042290 Theobroma cacao TCM_042290 N 0.859
Pm000247 Prunus mume Pm000247 N 0.859
Pavir.Ba00225 Panicum virgatum Pavir.Ba00225 N 0.859
Pavir.Bb03754 Panicum virgatum Pavir.Bb03754 N 0.859
GLYMA09G15521 Glycine max GLYMA09G15521 N 0.852
Bra021635 Brassica rapa Bra021635 N 0.850
Aquca_008_00005 Aquilegia coerulea Aquca_008_00005 N 0.850
Gorai.003G152700 Gossypium raimondii Gorai.003G152700 N 0.850
GLYMA11G31234 Glycine max GLYMA11G31234 N 0.848
GLYMA18G05840 Glycine max GLYMA18G05840 N 0.848
GRMZM2G158162 Zea mays GRMZM2G158162 N 0.848
GRMZM2G172621 Zea mays GRMZM2G172621 N 0.848
Sb02g043000 Sorghum bicolor Sb02g043000 N 0.848
Solyc06g082520.2 Solanum lycopersicum Solyc06g082520.2 N 0.848
Ciclev10000225m.g Citrus clementina Ciclev10000225m.g N 0.848
Lus10022741.g Linum usitatissimum Lus10022741.g N 0.848
PK09020.1 Cannabis sativa PK09020.1 N 0.848
Bo4g058460 Brassica oleracea Bo4g058460 N 0.838
Bra018313 Brassica rapa Bra018313 N 0.838
GSMUA_Achr5G27930_001 Musa acuminata GSMUA_Achr5G27930_001 N 0.838
GSMUA_Achr8G01750_001 Musa acuminata GSMUA_Achr8G01750_001 N 0.838
cassava13133.valid.m1 Manihot esculenta cassava13133.valid.m1 N 0.838
mgf013365m Mimulus guttatus mgf013365m N 0.838
mgf024907m Mimulus guttatus mgf024907m N 0.838
evm.TU.supercontig_2.296 Carica papaya evm.TU.supercontig_2.296 N 0.838
gene28098-v1.0-hybrid Fragaria vesca gene28098-v1.0-hybrid N 0.838
MDP0000127640 Malus domestica MDP0000127640 N 0.838
MDP0000229344 Malus domestica MDP0000229344 N 0.838
MDP0000267885 Malus domestica MDP0000267885 N 0.838
Bo3g024640 Brassica oleracea Bo3g024640 N 0.828
Bra022801 Brassica rapa Bra022801 N 0.828
POPTR_0019s15070 Populus trichocarpa POPTR_0019s15070 N 0.828
SELMODRAFT_451626 Selaginella moellendorffii SELMODRAFT_451626 N 0.828
SELMODRAFT_451631 Selaginella moellendorffii SELMODRAFT_451631 N 0.828
VIT_06s0004g08100 Vitis vinifera VIT_06s0004g08100 N 0.828
Ca_08924 Cicer arietinum Ca_08924 N 0.828
Cla008225 Citrullus lanatus Cla008225 N 0.828
Bostr.24513s0191 Boechera stricta Bostr.24513s0191 N 0.828
Cagra.0567s0011 Capsella grandiflora Cagra.0567s0011 N 0.828
Carubv10022654m.g Capsella rubella Carubv10022654m.g N 0.828
GLYMA14G38492 Glycine max GLYMA14G38492 N 0.818
MTR_3g467380 Medicago truncatula MTR_3g467380 N 0.818
HSI2 Arabidopsis lyrata scaffold_401535.1 N 0.818
29976.m000497 Ricinus communis 29976.m000497 N 0.818
SapurV1A.0215s0260 Salix purpurea SapurV1A.0215s0260 N 0.818
Thhalv10016263m.g Eutrema salsugineum Thhalv10016263m.g N 0.818
VAL2 Arabidopsis thaliana AT4G32010 N 0.814
MLOC_36861 Hordeum vulgare MLOC_36861 N 0.814
HSL1 Arabidopsis lyrata scaffold_700997.1 N 0.814
Cagra.12385s0007 Capsella grandiflora Cagra.12385s0007 N 0.814
Carubv10004194m.g Capsella rubella Carubv10004194m.g N 0.814
GLYMA02G40280 Glycine max GLYMA02G40280 N 0.812
LjSGA_029833.1 Lotus japonicus LjSGA_029833.1 N 0.811
VAL1 Arabidopsis thaliana AT2G30470 N 0.808
PDK_20s1314471g001 Phoenix dactylifera PDK_20s1314471g001 N 0.804
Ca_00244 Cicer arietinum Ca_00244 N 0.802
Eucgr.E03467 Eucalyptus grandis Eucgr.E03467 N 0.800
POPTR_0013s15330 Populus trichocarpa POPTR_0013s15330 N 0.798
Bostr.10689s0100 Boechera stricta Bostr.10689s0100 N 0.788
SapurV1A.1353s0040 Salix purpurea SapurV1A.1353s0040 N 0.788
Thhalv10024526m.g Eutrema salsugineum Thhalv10024526m.g N 0.788
Bo1g024250 Brassica oleracea Bo1g024250 N 0.778
Bra013535 Brassica rapa Bra013535 N 0.778
Eucgr.B04027 Eucalyptus grandis Eucgr.B04027 N 0.778
F775_30051 Aegilops tauschii F775_30051 N 0.771
LjSGA_009543.1 Lotus japonicus LjSGA_009543.1 N 0.768
Cucsa.111990 Cucumis sativus Cucsa.111990 N 0.761
PDK_20s1455001g004 Phoenix dactylifera PDK_20s1455001g004 N 0.759
OPUNC07G24850 Oryza punctata OPUNC07G24850 N 0.758
Cagra.3519s0007 Capsella grandiflora Cagra.3519s0007 N 0.750
Ca_15659 Cicer arietinum Ca_15659 N 0.747
Carubv10004192m.g Capsella rubella Carubv10004192m.g N 0.747
SELMODRAFT_451634 Selaginella moellendorffii SELMODRAFT_451634 N 0.737
SELMODRAFT_451635 Selaginella moellendorffii SELMODRAFT_451635 N 0.737
PDK_20s1397381g002 Phoenix dactylifera PDK_20s1397381g002 N 0.725
Eucgr.L01474 Eucalyptus grandis Eucgr.L01474 N 0.718
MTR_5g075410 Medicago truncatula MTR_5g075410 N 0.711
MDP0000233653 Malus domestica MDP0000233653 N 0.703