POPTR_0010s14010 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0010s14010 T043860_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07858.1
M01123_2.00 		Cannabis sativa
HCACGTGB
VCACGTGD		 PBM
Lambert et al.(2019)
pTH11370 		0.914 1.000
PK20225.1
M01128_2.00 		Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274 		0.852 0.720
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0010s14010.1 bHLH 163 212

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA10G34910 Glycine max GLYMA10G34910 I 0.914
GLYMA20G32660 Glycine max GLYMA20G32660 I 0.914
MTR_1g093750 Medicago truncatula MTR_1g093750 I 0.914
PGSC0003DMG400007457 Solanum tuberosum PGSC0003DMG400007457 I 0.914
POPTR_0008s11490 Populus trichocarpa POPTR_0008s11490 I 0.914
PRUPE_ppa019406mg Prunus persica PRUPE_ppa019406mg I 0.914
SELMODRAFT_46532 Selaginella moellendorffii SELMODRAFT_46532 I 0.914
SELMODRAFT_56610 Selaginella moellendorffii SELMODRAFT_56610 I 0.914
TCM_011873 Theobroma cacao TCM_011873 I 0.914
VIT_01s0011g02940 Vitis vinifera VIT_01s0011g02940 I 0.914
Ca_08440 Cicer arietinum Ca_08440 I 0.914
Cla020671 Citrullus lanatus Cla020671 I 0.914
Pm029004 Prunus mume Pm029004 I 0.914
29738.m001043 Ricinus communis 29738.m001043 I 0.914
cassava16550.m1 Manihot esculenta cassava16550.m1 I 0.914
cassava46299.m1 Manihot esculenta cassava46299.m1 I 0.914
Cucsa.283920 Cucumis sativus Cucsa.283920 I 0.914
mgf017635m Mimulus guttatus mgf017635m I 0.914
Aquca_002_01095 Aquilegia coerulea Aquca_002_01095 I 0.914
Ciclev10031900m.g Citrus clementina Ciclev10031900m.g I 0.914
Eucgr.G02351 Eucalyptus grandis Eucgr.G02351 I 0.914
evm.TU.supercontig_53.118 Carica papaya evm.TU.supercontig_53.118 I 0.914
Gorai.008G186700 Gossypium raimondii Gorai.008G186700 I 0.914
Gorai.013G079600 Gossypium raimondii Gorai.013G079600 I 0.914
Lus10021711.g Linum usitatissimum Lus10021711.g I 0.914
Lus10035056.g Linum usitatissimum Lus10035056.g I 0.914
MDP0000271420 Malus domestica MDP0000271420 I 0.914
MDP0000319726 Malus domestica MDP0000319726 I 0.914
orange1.1g037785m.g Citrus sinensis orange1.1g037785m.g I 0.914
SapurV1A.0079s0530 Salix purpurea SapurV1A.0079s0530 I 0.914
SapurV1A.0304s0070 Salix purpurea SapurV1A.0304s0070 I 0.914
SapurV1A.3056s0010 Salix purpurea SapurV1A.3056s0010 I 0.914
PK07858.1 Cannabis sativa PK07858.1 D 0.914
GSMUA_Achr11G13440_001 Musa acuminata GSMUA_Achr11G13440_001 I 0.894
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.894
BHLH30 Arabidopsis thaliana AT1G68810 I 0.884
Bo6g108270 Brassica oleracea Bo6g108270 I 0.884
Bra004015 Brassica rapa Bra004015 I 0.884
Bra004338 Brassica rapa Bra004338 I 0.884
fgenesh2_kg.2__1138__AT1G68810.1 Arabidopsis lyrata fgenesh2_kg.2__1138__AT1G68810.1 I 0.884
GLYMA01G22530 Glycine max GLYMA01G22530 I 0.884
GLYMA02G11190 Glycine max GLYMA02G11190 I 0.884
PGSC0003DMG400000824 Solanum tuberosum PGSC0003DMG400000824 I 0.884
Solyc04g006990.2 Solanum lycopersicum Solyc04g006990.2 I 0.884
Solyc05g009880.2 Solanum lycopersicum Solyc05g009880.2 I 0.884
Ca_24775 Cicer arietinum Ca_24775 I 0.884
Cla000223 Citrullus lanatus Cla000223 I 0.884
Bostr.26959s0001 Boechera stricta Bostr.26959s0001 I 0.884
Cagra.1157s0003 Capsella grandiflora Cagra.1157s0003 I 0.884
Carubv10020515m.g Capsella rubella Carubv10020515m.g I 0.884
Thhalv10018758m.g Eutrema salsugineum Thhalv10018758m.g I 0.884
chr2.CM0749.390.nc Lotus japonicus chr2.CM0749.390.nc I 0.884
AMTR_s00101p00150740 Amborella trichopoda AMTR_s00101p00150740 I 0.869
AMTR_s00010p00144270 Amborella trichopoda AMTR_s00010p00144270 I 0.864
BHLH32 Arabidopsis thaliana AT3G25710 I 0.864
Bo2g138630 Brassica oleracea Bo2g138630 I 0.864
Bo7g081980 Brassica oleracea Bo7g081980 I 0.864
Bra025158 Brassica rapa Bra025158 I 0.864
Bra026510 Brassica rapa Bra026510 I 0.864
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.864
F775_10096 Aegilops tauschii F775_10096 I 0.864
BHLH32 Arabidopsis lyrata fgenesh2_kg.5__324__AT3G25710.1 I 0.864
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.864
GSMUA_Achr6G30610_001 Musa acuminata GSMUA_Achr6G30610_001 I 0.864
GSMUA_Achr7G07280_001 Musa acuminata GSMUA_Achr7G07280_001 I 0.864
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.864
MLOC_66385 Hordeum vulgare MLOC_66385 I 0.864
OB03G21490 Oryza brachyantha OB03G21490 I 0.864
OBART03G11320 Oryza barthii OBART03G11320 I 0.864
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.864
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.864
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.864
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.864
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.864
OS03G0260600 Oryza sativa OS03G0260600 I 0.864
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.864
SELMODRAFT_412681 Selaginella moellendorffii SELMODRAFT_412681 I 0.864
SELMODRAFT_417246 Selaginella moellendorffii SELMODRAFT_417246 I 0.864
Si039730m.g Setaria italica Si039730m.g I 0.864
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I 0.864
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I 0.864
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I 0.864
TRIUR3_31897 Triticum urartu TRIUR3_31897 I 0.864
Bostr.0556s0241 Boechera stricta Bostr.0556s0241 I 0.864
Cagra.0417s0002 Capsella grandiflora Cagra.0417s0002 I 0.864
Carubv10017470m.g Capsella rubella Carubv10017470m.g I 0.864
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.864
Thhalv10004524m.g Eutrema salsugineum Thhalv10004524m.g I 0.864
Bo6g095860 Brassica oleracea Bo6g095860 I 0.860
BRADI3G54070 Brachypodium distachyon BRADI3G54070 I 0.853
Traes_6BL_AEB13ECDE Triticum aestivum Traes_6BL_AEB13ECDE I 0.853
AMTR_s00002p00019320 Amborella trichopoda AMTR_s00002p00019320 I 0.852
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.852
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.852
GSMUA_Achr7G10740_001 Musa acuminata GSMUA_Achr7G10740_001 I 0.852
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.852
Ca_06386 Cicer arietinum Ca_06386 I 0.852
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.852
PK20225.1 Cannabis sativa PK20225.1 D 0.852
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.849
VIT_08s0040g01240 Vitis vinifera VIT_08s0040g01240 I 0.842
Aquca_004_00748 Aquilegia coerulea Aquca_004_00748 I 0.842
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.841
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I 0.840
BGIOSGA026937 Oryza indica BGIOSGA026937 I 0.840
BGIOSGA029777 Oryza indica BGIOSGA029777 I 0.840
GRMZM2G107276 Zea mays GRMZM2G107276 I 0.840
GRMZM2G526668 Zea mays GRMZM2G526668 I 0.840
LPERR08G12910 Leersia perrieri LPERR08G12910 I 0.840
LPERR09G06880 Leersia perrieri LPERR09G06880 I 0.840
OBART08G15650 Oryza barthii OBART08G15650 I 0.840
OGLUM08G16400 Oryza glumaepatula OGLUM08G16400 I 0.840
OMERI08G12930 Oryza meridionalis OMERI08G12930 I 0.840
OMERI09G07780 Oryza meridionalis OMERI09G07780 I 0.840
ONIVA08G16750 Oryza nivara ONIVA08G16750 I 0.840
ONIVA09G09550 Oryza nivara ONIVA09G09550 I 0.840
OPUNC08G13730 Oryza punctata OPUNC08G13730 I 0.840
ORGLA08G0137400 Oryza glaberrima ORGLA08G0137400 I 0.840
ORUFI08G17560 Oryza rufipogon ORUFI08G17560 I 0.840
ORUFI09G10670 Oryza rufipogon ORUFI09G10670 I 0.840
OS08G0432800 Oryza sativa OS08G0432800 I 0.840
OS09G0410700 Oryza sativa OS09G0410700 I 0.840
Sb07g021170 Sorghum bicolor Sb07g021170 I 0.840
Si013911m.g Setaria italica Si013911m.g I 0.840
Lus10034271.g Linum usitatissimum Lus10034271.g I 0.840
Lus10041493.g Linum usitatissimum Lus10041493.g I 0.840
F775_11347 Aegilops tauschii F775_11347 I 0.839
F775_14190 Aegilops tauschii F775_14190 I 0.839