CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_08440
(
Cicer arietinum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ca_08440
T046797_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07858.1
M01123_2.00
Cannabis sativa
HCACGTGB
VCACGTGD
PBM
Lambert et al.(2019)
pTH11370
0.914
0.980
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN
NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.852
0.720
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_08440
bHLH
169
218
ASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIEHVKELK
Links
Other
bHLH
family TFs
Other
Cicer arietinum
TFs
128 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA10G34910
Glycine max
GLYMA10G34910
I
0.914
GLYMA20G32660
Glycine max
GLYMA20G32660
I
0.914
MTR_1g093750
Medicago truncatula
MTR_1g093750
I
0.914
PGSC0003DMG400007457
Solanum tuberosum
PGSC0003DMG400007457
I
0.914
POPTR_0008s11490
Populus trichocarpa
POPTR_0008s11490
I
0.914
POPTR_0010s14010
Populus trichocarpa
POPTR_0010s14010
I
0.914
PRUPE_ppa019406mg
Prunus persica
PRUPE_ppa019406mg
I
0.914
SELMODRAFT_46532
Selaginella moellendorffii
SELMODRAFT_46532
I
0.914
SELMODRAFT_56610
Selaginella moellendorffii
SELMODRAFT_56610
I
0.914
TCM_011873
Theobroma cacao
TCM_011873
I
0.914
VIT_01s0011g02940
Vitis vinifera
VIT_01s0011g02940
I
0.914
Cla020671
Citrullus lanatus
Cla020671
I
0.914
Pm029004
Prunus mume
Pm029004
I
0.914
29738.m001043
Ricinus communis
29738.m001043
I
0.914
cassava16550.m1
Manihot esculenta
cassava16550.m1
I
0.914
cassava46299.m1
Manihot esculenta
cassava46299.m1
I
0.914
Cucsa.283920
Cucumis sativus
Cucsa.283920
I
0.914
mgf017635m
Mimulus guttatus
mgf017635m
I
0.914
Aquca_002_01095
Aquilegia coerulea
Aquca_002_01095
I
0.914
Ciclev10031900m.g
Citrus clementina
Ciclev10031900m.g
I
0.914
Eucgr.G02351
Eucalyptus grandis
Eucgr.G02351
I
0.914
evm.TU.supercontig_53.118
Carica papaya
evm.TU.supercontig_53.118
I
0.914
Gorai.008G186700
Gossypium raimondii
Gorai.008G186700
I
0.914
Gorai.013G079600
Gossypium raimondii
Gorai.013G079600
I
0.914
Lus10021711.g
Linum usitatissimum
Lus10021711.g
I
0.914
Lus10035056.g
Linum usitatissimum
Lus10035056.g
I
0.914
MDP0000271420
Malus domestica
MDP0000271420
I
0.914
MDP0000319726
Malus domestica
MDP0000319726
I
0.914
orange1.1g037785m.g
Citrus sinensis
orange1.1g037785m.g
I
0.914
SapurV1A.0079s0530
Salix purpurea
SapurV1A.0079s0530
I
0.914
SapurV1A.0304s0070
Salix purpurea
SapurV1A.0304s0070
I
0.914
SapurV1A.3056s0010
Salix purpurea
SapurV1A.3056s0010
I
0.914
PK07858.1
Cannabis sativa
PK07858.1
D
0.914
GSMUA_Achr11G13440_001
Musa acuminata
GSMUA_Achr11G13440_001
I
0.894
GSMUA_Achr1G21280_001
Musa acuminata
GSMUA_Achr1G21280_001
I
0.894
BHLH30
Arabidopsis thaliana
AT1G68810
I
0.884
Bo6g108270
Brassica oleracea
Bo6g108270
I
0.884
Bra004015
Brassica rapa
Bra004015
I
0.884
Bra004338
Brassica rapa
Bra004338
I
0.884
fgenesh2_kg.2__1138__AT1G68810.1
Arabidopsis lyrata
fgenesh2_kg.2__1138__AT1G68810.1
I
0.884
GLYMA01G22530
Glycine max
GLYMA01G22530
I
0.884
GLYMA02G11190
Glycine max
GLYMA02G11190
I
0.884
PGSC0003DMG400000824
Solanum tuberosum
PGSC0003DMG400000824
I
0.884
Solyc04g006990.2
Solanum lycopersicum
Solyc04g006990.2
I
0.884
Solyc05g009880.2
Solanum lycopersicum
Solyc05g009880.2
I
0.884
Ca_24775
Cicer arietinum
Ca_24775
I
0.884
Cla000223
Citrullus lanatus
Cla000223
I
0.884
Bostr.26959s0001
Boechera stricta
Bostr.26959s0001
I
0.884
Cagra.1157s0003
Capsella grandiflora
Cagra.1157s0003
I
0.884
Carubv10020515m.g
Capsella rubella
Carubv10020515m.g
I
0.884
Thhalv10018758m.g
Eutrema salsugineum
Thhalv10018758m.g
I
0.884
chr2.CM0749.390.nc
Lotus japonicus
chr2.CM0749.390.nc
I
0.884
AMTR_s00101p00150740
Amborella trichopoda
AMTR_s00101p00150740
I
0.869
AMTR_s00010p00144270
Amborella trichopoda
AMTR_s00010p00144270
I
0.864
BHLH32
Arabidopsis thaliana
AT3G25710
I
0.864
Bo2g138630
Brassica oleracea
Bo2g138630
I
0.864
Bo7g081980
Brassica oleracea
Bo7g081980
I
0.864
Bra025158
Brassica rapa
Bra025158
I
0.864
Bra026510
Brassica rapa
Bra026510
I
0.864
BRADI1G67500
Brachypodium distachyon
BRADI1G67500
I
0.864
F775_10096
Aegilops tauschii
F775_10096
I
0.864
BHLH32
Arabidopsis lyrata
fgenesh2_kg.5__324__AT3G25710.1
I
0.864
GRMZM2G043854
Zea mays
GRMZM2G043854
I
0.864
GSMUA_Achr6G30610_001
Musa acuminata
GSMUA_Achr6G30610_001
I
0.864
GSMUA_Achr7G07280_001
Musa acuminata
GSMUA_Achr7G07280_001
I
0.864
LPERR03G10060
Leersia perrieri
LPERR03G10060
I
0.864
MLOC_66385
Hordeum vulgare
MLOC_66385
I
0.864
OB03G21490
Oryza brachyantha
OB03G21490
I
0.864
OBART03G11320
Oryza barthii
OBART03G11320
I
0.864
OGLUM03G11280
Oryza glumaepatula
OGLUM03G11280
I
0.864
OLONG_004075
Oryza longistaminata
OLONG_004075
I
0.864
ONIVA03G12280
Oryza nivara
ONIVA03G12280
I
0.864
ORGLA03G0109100
Oryza glaberrima
ORGLA03G0109100
I
0.864
ORUFI03G11650
Oryza rufipogon
ORUFI03G11650
I
0.864
OS03G0260600
Oryza sativa
OS03G0260600
I
0.864
Sb01g040450
Sorghum bicolor
Sb01g040450
I
0.864
SELMODRAFT_412681
Selaginella moellendorffii
SELMODRAFT_412681
I
0.864
SELMODRAFT_417246
Selaginella moellendorffii
SELMODRAFT_417246
I
0.864
Si039730m.g
Setaria italica
Si039730m.g
I
0.864
Traes_4AS_DD16F89E7
Triticum aestivum
Traes_4AS_DD16F89E7
I
0.864
Traes_4BL_A2B32FCEE
Triticum aestivum
Traes_4BL_A2B32FCEE
I
0.864
Traes_4DL_7BD3165FB
Triticum aestivum
Traes_4DL_7BD3165FB
I
0.864
TRIUR3_31897
Triticum urartu
TRIUR3_31897
I
0.864
Bostr.0556s0241
Boechera stricta
Bostr.0556s0241
I
0.864
Cagra.0417s0002
Capsella grandiflora
Cagra.0417s0002
I
0.864
Carubv10017470m.g
Capsella rubella
Carubv10017470m.g
I
0.864
Pavir.Ib01099
Panicum virgatum
Pavir.Ib01099
I
0.864
Thhalv10004524m.g
Eutrema salsugineum
Thhalv10004524m.g
I
0.864
Bo6g095860
Brassica oleracea
Bo6g095860
I
0.860
BRADI3G54070
Brachypodium distachyon
BRADI3G54070
I
0.853
Traes_6BL_AEB13ECDE
Triticum aestivum
Traes_6BL_AEB13ECDE
I
0.853
AMTR_s00002p00019320
Amborella trichopoda
AMTR_s00002p00019320
I
0.852
GLYMA02G15780
Glycine max
GLYMA02G15780
I
0.852
GLYMA07G32690
Glycine max
GLYMA07G32690
I
0.852
GSMUA_Achr7G10740_001
Musa acuminata
GSMUA_Achr7G10740_001
I
0.852
MTR_4g087920
Medicago truncatula
MTR_4g087920
I
0.852
Ca_06386
Cicer arietinum
Ca_06386
I
0.852
evm.TU.supercontig_7.53
Carica papaya
evm.TU.supercontig_7.53
I
0.852
PK20225.1
Cannabis sativa
PK20225.1
D
0.852
Aquca_081_00012
Aquilegia coerulea
Aquca_081_00012
I
0.849
VIT_08s0040g01240
Vitis vinifera
VIT_08s0040g01240
I
0.842
Aquca_004_00748
Aquilegia coerulea
Aquca_004_00748
I
0.842
LPERR01G07000
Leersia perrieri
LPERR01G07000
I
0.841
AMTR_s00007p00170710
Amborella trichopoda
AMTR_s00007p00170710
I
0.840
BGIOSGA026937
Oryza indica
BGIOSGA026937
I
0.840
BGIOSGA029777
Oryza indica
BGIOSGA029777
I
0.840
GRMZM2G107276
Zea mays
GRMZM2G107276
I
0.840
GRMZM2G526668
Zea mays
GRMZM2G526668
I
0.840
LPERR08G12910
Leersia perrieri
LPERR08G12910
I
0.840
LPERR09G06880
Leersia perrieri
LPERR09G06880
I
0.840
OBART08G15650
Oryza barthii
OBART08G15650
I
0.840
OGLUM08G16400
Oryza glumaepatula
OGLUM08G16400
I
0.840
OMERI08G12930
Oryza meridionalis
OMERI08G12930
I
0.840
OMERI09G07780
Oryza meridionalis
OMERI09G07780
I
0.840
ONIVA08G16750
Oryza nivara
ONIVA08G16750
I
0.840
ONIVA09G09550
Oryza nivara
ONIVA09G09550
I
0.840
OPUNC08G13730
Oryza punctata
OPUNC08G13730
I
0.840
ORGLA08G0137400
Oryza glaberrima
ORGLA08G0137400
I
0.840
ORUFI08G17560
Oryza rufipogon
ORUFI08G17560
I
0.840
ORUFI09G10670
Oryza rufipogon
ORUFI09G10670
I
0.840
OS08G0432800
Oryza sativa
OS08G0432800
I
0.840
OS09G0410700
Oryza sativa
OS09G0410700
I
0.840
Sb07g021170
Sorghum bicolor
Sb07g021170
I
0.840
Si013911m.g
Setaria italica
Si013911m.g
I
0.840
Lus10034271.g
Linum usitatissimum
Lus10034271.g
I
0.840
Lus10041493.g
Linum usitatissimum
Lus10041493.g
I
0.840
F775_11347
Aegilops tauschii
F775_11347
I
0.839
F775_14190
Aegilops tauschii
F775_14190
I
0.839