CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_04s0023g01660
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_04s0023g01660
T201817_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_04s0023g01660.t01
GRAS
248
585
ILKALLDCARLADSEPDRAVKSLIRLRESVSEHGDPTERVAFYFSEALYSRVSHQAEKRPTLFETSSEEFTLSYKALNDACPYSKFAHLTANQAILEATERARKIHIVDFGIVQGVQWAALLQALATRSAGKPARIRISGIPAPALGKSPASSLFATGNRLRDFARLLDLNFEFEPILTPIQELNESTFRVDPDEVLAVNFMLQLYNLLDETPVSVNAALRLAKSLNPKIMTLGEYEACLNEVDFINRFKNALRYYRAIFDSLEPNLARDSSDRLQVERLLLGRRIAGVIGPEEPGTRRERMEDKEKWKFLVESCGFESVPLSHYASIDEAWKEVTNR
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29634.m002156
Ricinus communis
29634.m002156
N
0.793
cassava18797.valid.m1
Manihot esculenta
cassava18797.valid.m1
N
0.793
cassava35611.valid.m1
Manihot esculenta
cassava35611.valid.m1
N
0.793
evm.TU.supercontig_6.108
Carica papaya
evm.TU.supercontig_6.108
N
0.793
Gorai.008G068100
Gossypium raimondii
Gorai.008G068100
N
0.787
Gorai.003G015400
Gossypium raimondii
Gorai.003G015400
N
0.775
PRUPE_ppa003124mg
Prunus persica
PRUPE_ppa003124mg
N
0.769
Pm026616
Prunus mume
Pm026616
N
0.763
TCM_000399
Theobroma cacao
TCM_000399
N
0.758
gene14780-v1.0-hybrid
Fragaria vesca
gene14780-v1.0-hybrid
N
0.740
Lus10041740.g
Linum usitatissimum
Lus10041740.g
N
0.737
MDP0000575908
Malus domestica
MDP0000575908
N
0.737
SapurV1A.1131s0040
Salix purpurea
SapurV1A.1131s0040
N
0.734
POPTR_0005s12520
Populus trichocarpa
POPTR_0005s12520
N
0.722
Aquca_010_00478
Aquilegia coerulea
Aquca_010_00478
N
0.722
POPTR_0007s12760
Populus trichocarpa
POPTR_0007s12760
N
0.716
SapurV1A.0254s0130
Salix purpurea
SapurV1A.0254s0130
N
0.716
SapurV1A.4211s0010
Salix purpurea
SapurV1A.4211s0010
N
0.716
PK13108.1
Cannabis sativa
PK13108.1
N
0.716
mgf021185m
Mimulus guttatus
mgf021185m
N
0.713
Cla014744
Citrullus lanatus
Cla014744
N
0.710