cassava18797.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava18797.valid.m1 T202055_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava18797.valid.m1 GRAS 237 605

Links

Other GRAS family TFs
Other Manihot esculenta TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava35611.valid.m1 Manihot esculenta cassava35611.valid.m1 N 0.901
29634.m002156 Ricinus communis 29634.m002156 N 0.871
TCM_000399 Theobroma cacao TCM_000399 N 0.846
Gorai.003G015400 Gossypium raimondii Gorai.003G015400 N 0.843
Gorai.008G068100 Gossypium raimondii Gorai.008G068100 N 0.835
evm.TU.supercontig_6.108 Carica papaya evm.TU.supercontig_6.108 N 0.813
Lus10024014.g Linum usitatissimum Lus10024014.g N 0.813
Lus10041740.g Linum usitatissimum Lus10041740.g N 0.813
PRUPE_ppa003124mg Prunus persica PRUPE_ppa003124mg N 0.810
Pm026616 Prunus mume Pm026616 N 0.804
VIT_04s0023g01660 Vitis vinifera VIT_04s0023g01660 N 0.793
SapurV1A.1131s0040 Salix purpurea SapurV1A.1131s0040 N 0.782
POPTR_0007s12760 Populus trichocarpa POPTR_0007s12760 N 0.780
POPTR_0005s12520 Populus trichocarpa POPTR_0005s12520 N 0.777
MDP0000575908 Malus domestica MDP0000575908 N 0.774
SapurV1A.4211s0010 Salix purpurea SapurV1A.4211s0010 N 0.769
SapurV1A.0254s0130 Salix purpurea SapurV1A.0254s0130 N 0.769
gene14780-v1.0-hybrid Fragaria vesca gene14780-v1.0-hybrid N 0.763
PK13108.1 Cannabis sativa PK13108.1 N 0.747
Cla014744 Citrullus lanatus Cla014744 N 0.744
PGSC0003DMG400014900 Solanum tuberosum PGSC0003DMG400014900 N 0.738
chr3.CM0127.460.nc Lotus japonicus chr3.CM0127.460.nc N 0.737
Cucsa.201400 Cucumis sativus Cucsa.201400 N 0.727
Eucgr.I02451 Eucalyptus grandis Eucgr.I02451 N 0.727
Cucsa.127390 Cucumis sativus Cucsa.127390 N 0.727
Aquca_010_00478 Aquilegia coerulea Aquca_010_00478 N 0.725
Solyc02g085340.1 Solanum lycopersicum Solyc02g085340.1 N 0.723
Bostr.0568s0096 Boechera stricta Bostr.0568s0096 N 0.723
SCL4 Arabidopsis thaliana AT5G66770 N 0.719
GLYMA11G09761 Glycine max GLYMA11G09761 N 0.717
Cla014426 Citrullus lanatus Cla014426 N 0.708
Thhalv10003860m.g Eutrema salsugineum Thhalv10003860m.g N 0.708