cassava38612.m1 (Manihot esculenta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 cassava38612.m1 T257225_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava38612.m1 MADS box 10 55

Links

Other MADS box family TFs
Other Manihot esculenta TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0690s0130 Salix purpurea SapurV1A.0690s0130 N 0.854
TCM_021050 Theobroma cacao TCM_021050 N 0.829
Gorai.009G302800 Gossypium raimondii Gorai.009G302800 N 0.829
Cla009163 Citrullus lanatus Cla009163 I 0.805
AGL87 Populus trichocarpa POPTR_0013s11210 N 0.766
TCM_036473 Theobroma cacao TCM_036473 N 0.756
Cucsa.224270 Cucumis sativus Cucsa.224270 I 0.756
Ciclev10003090m.g Citrus clementina Ciclev10003090m.g N 0.756
orange1.1g040635m.g Citrus sinensis orange1.1g040635m.g N 0.756
TCM_026842 Theobroma cacao TCM_026842 I 0.707
Bostr.29827s0158 Boechera stricta Bostr.29827s0158 I 0.707
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I 0.707