Bra031041 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra031041 T268059_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra031041.1-P Myb 2 21
Bra031041.1-P Myb 27 72

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.17198s0001 Capsella grandiflora Cagra.17198s0001 N 0.778
Cagra.1655s0054 Capsella grandiflora Cagra.1655s0054 N 0.770
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.738
BRADI2G11080 Brachypodium distachyon BRADI2G11080 I 0.724
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.722
GLYMA08G44950 Glycine max GLYMA08G44950 N 0.718
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.717
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.716
PDK_20s1338951g004 Phoenix dactylifera PDK_20s1338951g004 N 0.712
MYB86 Arabidopsis thaliana AT5G26660 I 0.711
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.711
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.708
BGIOSGA027658 Oryza indica BGIOSGA027658 N 0.705
mgf026463m Mimulus guttatus mgf026463m N 0.704
Traes_3DL_75F8A05CF Triticum aestivum Traes_3DL_75F8A05CF N 0.701
Cagra.2519s0060 Capsella grandiflora Cagra.2519s0060 N 0.701
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.700
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.699
MYB21 Arabidopsis thaliana AT3G27810 I 0.697
MYB24 Arabidopsis thaliana AT5G40350 D 0.697
Traes_5AS_7D519210E Triticum aestivum Traes_5AS_7D519210E N 0.695
Traes_5BS_D1C03C165 Triticum aestivum Traes_5BS_D1C03C165 N 0.695
Traes_5DS_1EF547639 Triticum aestivum Traes_5DS_1EF547639 N 0.695
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.693
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.693
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I 0.693
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I 0.693
PK27824.1 Cannabis sativa PK27824.1 N 0.693
SapurV1A.1387s0090 Salix purpurea SapurV1A.1387s0090 I 0.692
PDK_20s1354851g002 Phoenix dactylifera PDK_20s1354851g002 N 0.691
30147.m013749 Ricinus communis 30147.m013749 N 0.690
TT2 Arabidopsis thaliana AT5G35550 I 0.689
GLYMA16G00920 Glycine max GLYMA16G00920 I 0.689
MDP0000153773 Malus domestica MDP0000153773 N 0.689
MYB59 Arabidopsis thaliana AT5G59780 D 0.688
cassava11833.valid.m1 Manihot esculenta cassava11833.valid.m1 N 0.688
Bostr.26833s0259 Boechera stricta Bostr.26833s0259 N 0.688
Cagra.1317s0038 Capsella grandiflora Cagra.1317s0038 N 0.688
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N 0.688
gene13970-v1.0-hybrid Fragaria vesca gene13970-v1.0-hybrid N 0.688
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.688
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.688
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.688
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.688
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.686
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.686
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N 0.685
BGIOSGA002307 Oryza indica BGIOSGA002307 N 0.684
WER Arabidopsis thaliana AT5G14750 D 0.683
BGIOSGA013008 Oryza indica BGIOSGA013008 N 0.683
MDP0000475808 Malus domestica MDP0000475808 N 0.682
Pavir.Ia02093 Panicum virgatum Pavir.Ia02093 N 0.682
SapurV1A.0552s0030 Salix purpurea SapurV1A.0552s0030 I 0.682
BGIOSGA037085 Oryza indica BGIOSGA037085 N 0.681
Bra009910 Brassica rapa Bra009910 N 0.681
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.681
OBART12G16130 Oryza barthii OBART12G16130 N 0.681
OGLUM12G17720 Oryza glumaepatula OGLUM12G17720 N 0.681
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.681
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.681
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.681
MYB94 Arabidopsis thaliana AT3G47600 D 0.679
Bo5g131980 Brassica oleracea Bo5g131980 N 0.679
GRMZM2G032180 Zea mays GRMZM2G032180 N 0.677
OS01G0975300 Oryza sativa OS01G0975300 N 0.677
Pavir.J19088 Panicum virgatum Pavir.J19088 N 0.677
Pavir.J23620 Panicum virgatum Pavir.J23620 N 0.677
Traes_5AS_D9A4C1AB0 Triticum aestivum Traes_5AS_D9A4C1AB0 N 0.676
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.676
Traes_2DL_304E62CCE Triticum aestivum Traes_2DL_304E62CCE N 0.675
mgf001247m Mimulus guttatus mgf001247m N 0.675
mgf021749m Mimulus guttatus mgf021749m N 0.675
PDK_20s1933711g001 Phoenix dactylifera PDK_20s1933711g001 N 0.675
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N 0.674
MDP0000244980 Malus domestica MDP0000244980 N 0.674
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.673
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.673
Ciclev10029019m.g Citrus clementina Ciclev10029019m.g N 0.673
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.673
LjSGA_148662.1 Lotus japonicus LjSGA_148662.1 N 0.673
Pavir.Gb01276 Panicum virgatum Pavir.Gb01276 N 0.672
GRMZM2G106558 Zea mays GRMZM2G106558 I 0.671
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.671
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.670
Pavir.J24653 Panicum virgatum Pavir.J24653 N 0.670
PDK_20s1528141g001 Phoenix dactylifera PDK_20s1528141g001 N 0.670
MDP0000470422 Malus domestica MDP0000470422 N 0.669
MYB114 Arabidopsis thaliana AT1G66380 I 0.668
TCM_005371 Theobroma cacao TCM_005371 I 0.668
Bostr.3125s0001 Boechera stricta Bostr.3125s0001 N 0.668
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I 0.667
TRIUR3_12300 Triticum urartu TRIUR3_12300 N 0.667
Traes_2BL_DAA2104F5 Triticum aestivum Traes_2BL_DAA2104F5 N 0.665
orange1.1g038824m.g Citrus sinensis orange1.1g038824m.g N 0.664
SapurV1A.0093s0250 Salix purpurea SapurV1A.0093s0250 I 0.664
PDK_20s1316381g001 Phoenix dactylifera PDK_20s1316381g001 N 0.664
AtMYB10 Arabidopsis thaliana AT3G12820 D 0.663
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.663
TCM_013983 Theobroma cacao TCM_013983 I 0.662
evm.TU.supercontig_87.85 Carica papaya evm.TU.supercontig_87.85 N 0.662
MDP0000139931 Malus domestica MDP0000139931 N 0.662
MDP0000169874 Malus domestica MDP0000169874 N 0.662
F775_32151 Aegilops tauschii F775_32151 N 0.661
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.661
Si003873m.g Setaria italica Si003873m.g N 0.661
evm.TU.contig_33658 Carica papaya evm.TU.contig_33658 N 0.661