MTR_2g034960 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_2g034960 T274733_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.727 0.894
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.702 0.787
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.694 0.851
ARR14
M00873_2.00 		Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN		 PBM
Franco-Zorrilla et al.(2014)
ARR14 		0.674 0.787
ARR14
M02293_2.00 		Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN		 PBM
Weirauch et al.(2014)
pTH7531 		0.674 0.787
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.669 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES65067 Myb 213 263

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_14780 Cicer arietinum Ca_14780 I 0.832
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.817
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.809
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.809
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.791
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.791
Ca_15151 Cicer arietinum Ca_15151 I 0.791
MDP0000124301 Malus domestica MDP0000124301 I 0.791
MDP0000155328 Malus domestica MDP0000155328 I 0.791
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.789
Pm005877 Prunus mume Pm005877 I 0.789
MDP0000311914 Malus domestica MDP0000311914 I 0.763
GLYMA09G04470 Glycine max GLYMA09G04470 I 0.757
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.742
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.742
Bo2g028820 Brassica oleracea Bo2g028820 I 0.741
Bra020390 Brassica rapa Bra020390 I 0.741
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.741
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.741
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.741
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.741
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.741
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.738
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.734
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.734
Bostr.0556s0001 Boechera stricta Bostr.0556s0001 I 0.734
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.734
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.734
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.734
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.734
Bo1g055180 Brassica oleracea Bo1g055180 I 0.727
Bra033527 Brassica rapa Bra033527 I 0.727
ARR2 Arabidopsis lyrata scaffold_702902.1 I 0.727
Bostr.30275s0051 Boechera stricta Bostr.30275s0051 I 0.727
Cagra.0053s0018 Capsella grandiflora Cagra.0053s0018 I 0.727
Carubv10007581m.g Capsella rubella Carubv10007581m.g I 0.727
Thhalv10024686m.g Eutrema salsugineum Thhalv10024686m.g I 0.727
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.723
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.723
TCM_037098 Theobroma cacao TCM_037098 I 0.723
29737.m001227 Ricinus communis 29737.m001227 I 0.723
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.723
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.722
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.715
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.712
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.712
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.709
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.709
GSMUA_Achr9G16610_001 Musa acuminata GSMUA_Achr9G16610_001 I 0.709
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.709
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.709
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.709
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.709
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.709
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.709
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.709
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.709
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.709
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.709
TCM_021300 Theobroma cacao TCM_021300 I 0.709
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.709
Ca_02989 Cicer arietinum Ca_02989 I 0.709
Cla009424 Citrullus lanatus Cla009424 I 0.709
Cla022101 Citrullus lanatus Cla022101 I 0.709
29889.m003245 Ricinus communis 29889.m003245 I 0.709
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.709
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.709
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.709
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.709
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.709
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.709
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.709
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.709
Lus10016846.g Linum usitatissimum Lus10016846.g I 0.709
Lus10037719.g Linum usitatissimum Lus10037719.g I 0.709
MDP0000224740 Malus domestica MDP0000224740 I 0.709
MDP0000290818 Malus domestica MDP0000290818 I 0.709
PK26059.1 Cannabis sativa PK26059.1 I 0.709
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.708
Pm027701 Prunus mume Pm027701 I 0.708
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.708
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.708
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.708
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.708
chr4.CM0042.1440.nc Lotus japonicus chr4.CM0042.1440.nc I 0.703
ARR18 Arabidopsis lyrata Al_scaffold_0008_2276 I 0.702
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.702
ARR18 Arabidopsis thaliana AT5G58080 D 0.702
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.702
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.702
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.702
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.702
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.702
TCM_011067 Theobroma cacao TCM_011067 I 0.702
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.702
27647.m000179 Ricinus communis 27647.m000179 I 0.702
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.702
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.702
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.702
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.702
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.702
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.702
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.702
mgf008790m Mimulus guttatus mgf008790m I 0.700
mgf010113m Mimulus guttatus mgf010113m I 0.700
mgf012203m Mimulus guttatus mgf012203m I 0.700
estExt_Genewise1.C_90203 Chlorella NC64A estExt_Genewise1.C_90203 I 0.696
ARR1 Arabidopsis thaliana AT3G16857 D 0.694
Bo3g068550 Brassica oleracea Bo3g068550 I 0.694
Bo5g123620 Brassica oleracea Bo5g123620 I 0.694
Bra001643 Brassica rapa Bra001643 I 0.694
Bra022183 Brassica rapa Bra022183 I 0.694
ARR1 Arabidopsis lyrata fgenesh2_kg.3__1853__AT3G16857.2 I 0.694
Bostr.28625s0008 Boechera stricta Bostr.28625s0008 I 0.694
Cagra.5497s0018 Capsella grandiflora Cagra.5497s0018 I 0.694
Carubv10013107m.g Capsella rubella Carubv10013107m.g I 0.694
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.694
gene05178-v1.0-hybrid Fragaria vesca gene05178-v1.0-hybrid I 0.689
TCM_015085 Theobroma cacao TCM_015085 I 0.688
LjSGA_066155.1 Lotus japonicus LjSGA_066155.1 I 0.688
MTR_7g026400 Medicago truncatula MTR_7g026400 I 0.683
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I 0.682
F775_03134 Aegilops tauschii F775_03134 I 0.679
F775_03846 Aegilops tauschii F775_03846 I 0.679
TRIUR3_20429 Triticum urartu TRIUR3_20429 I 0.679
PRUPE_ppa023185mg Prunus persica PRUPE_ppa023185mg N 0.677
Ca_20899 Cicer arietinum Ca_20899 I 0.677
MTR_0450s0040 Medicago truncatula MTR_0450s0040 I 0.676
ARR14 Arabidopsis thaliana AT2G01760 D 0.674
ARR14 Arabidopsis lyrata scaffold_500093.1 I 0.674
SELMODRAFT_187683 Selaginella moellendorffii SELMODRAFT_187683 I 0.669
SELMODRAFT_418787 Selaginella moellendorffii SELMODRAFT_418787 I 0.669
e_gw1.362.4.1 Physcomitrella patens e_gw1.362.4.1 D 0.669
SapurV1A.0739s0030 Salix purpurea SapurV1A.0739s0030 I 0.669
Bo7g104190 Brassica oleracea Bo7g104190 I 0.667
Bra012743 Brassica rapa Bra012743 I 0.667
LjSGA_125152.1 Lotus japonicus LjSGA_125152.1 I 0.667
Thhalv10004402m.g Eutrema salsugineum Thhalv10004402m.g I 0.666
GRMZM2G409974 Zea mays GRMZM2G409974 I 0.665
MLOC_11341 Hordeum vulgare MLOC_11341 I 0.665
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.663
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.663
Cucsa.069440 Cucumis sativus Cucsa.069440 I 0.663
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.663
EuGene.0000130210 Micromonas pusilla EuGene.0000130210 I 0.661
estExt_fgenesh2_pg.C_Chr_100175 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_100175 I 0.661