chr4.CM0042.1440.nc (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr4.CM0042.1440.nc T290712_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.702 0.702
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.661 0.723
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.661 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0042.1440.nc Myb 198 248

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_15151 Cicer arietinum Ca_15151 I 0.757
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.757
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.757
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.757
MDP0000124301 Malus domestica MDP0000124301 I 0.757
MDP0000155328 Malus domestica MDP0000155328 I 0.757
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.755
Pm005877 Prunus mume Pm005877 I 0.755
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.750
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.750
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.749
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.749
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.749
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.749
GLYMA05G34516 Glycine max GLYMA05G34516 I 0.747
Ca_14780 Cicer arietinum Ca_14780 I 0.746
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.742
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.742
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.742
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.742
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.742
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.742
29737.m001227 Ricinus communis 29737.m001227 I 0.742
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.742
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.742
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.742
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.742
TCM_037098 Theobroma cacao TCM_037098 I 0.742
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.742
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.742
Pm027701 Prunus mume Pm027701 I 0.742
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.742
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.742
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.742
Bra020390 Brassica rapa Bra020390 I 0.742
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.742
Bo2g028820 Brassica oleracea Bo2g028820 I 0.742
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.742
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.742
LjSGA_125152.1 Lotus japonicus LjSGA_125152.1 I 0.733
MTR_7g026400 Medicago truncatula MTR_7g026400 I 0.729
MTR_0450s0040 Medicago truncatula MTR_0450s0040 I 0.728
LjSGA_060038.1 Lotus japonicus LjSGA_060038.1 I 0.711
TCM_015085 Theobroma cacao TCM_015085 I 0.707
Ca_20899 Cicer arietinum Ca_20899 I 0.707
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.707
MDP0000311914 Malus domestica MDP0000311914 I 0.704
MTR_2g034960 Medicago truncatula MTR_2g034960 I 0.703
ARR18 Arabidopsis lyrata Al_scaffold_0008_2276 I 0.702
ARR18 Arabidopsis thaliana AT5G58080 D 0.702
GLYMA16G32311 Glycine max GLYMA16G32311 I 0.699
LjSGA_066155.1 Lotus japonicus LjSGA_066155.1 I 0.696
Traes_7DS_327FBC2CA Triticum aestivum Traes_7DS_327FBC2CA I 0.695
F775_14758 Aegilops tauschii F775_14758 I 0.695
GLYMA09G27151 Glycine max GLYMA09G27151 N 0.689
orange1.1g009670m.g Citrus sinensis orange1.1g009670m.g I 0.689
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.682
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.682
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.682
Ca_03351 Cicer arietinum Ca_03351 I 0.680
F775_03846 Aegilops tauschii F775_03846 I 0.675
TRIUR3_20429 Triticum urartu TRIUR3_20429 I 0.675
TRIUR3_25232 Triticum urartu TRIUR3_25232 I 0.675
F775_03134 Aegilops tauschii F775_03134 I 0.675
Cla007104 Citrullus lanatus Cla007104 N 0.669
evm.TU.supercontig_107.3 Carica papaya evm.TU.supercontig_107.3 N 0.669
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.669
cassava35050.m1 Manihot esculenta cassava35050.m1 N 0.669
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.668
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.668
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.668
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.668
TCM_011067 Theobroma cacao TCM_011067 I 0.668
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.668
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.668
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.668
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.668
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I 0.668
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.668
27647.m000179 Ricinus communis 27647.m000179 I 0.668
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.668
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.668
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.668
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.668
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.668
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.668
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.667
mgf010113m Mimulus guttatus mgf010113m I 0.666
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.666
mgf012203m Mimulus guttatus mgf012203m I 0.666
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.666
GSMUA_Achr10G23650_001 Musa acuminata GSMUA_Achr10G23650_001 N 0.665
mgf019327m Mimulus guttatus mgf019327m N 0.665
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.661
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.661
Lus10016846.g Linum usitatissimum Lus10016846.g I 0.661
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.661
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.661
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.661
Lus10037719.g Linum usitatissimum Lus10037719.g I 0.661
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.661
MDP0000290818 Malus domestica MDP0000290818 I 0.661
MDP0000224740 Malus domestica MDP0000224740 I 0.661
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.661
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.661
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.661
Thhalv10024686m.g Eutrema salsugineum Thhalv10024686m.g I 0.661
Cagra.0053s0018 Capsella grandiflora Cagra.0053s0018 I 0.661
Bostr.30275s0051 Boechera stricta Bostr.30275s0051 I 0.661
Bostr.28625s0008 Boechera stricta Bostr.28625s0008 I 0.661
Cagra.5497s0018 Capsella grandiflora Cagra.5497s0018 I 0.661
Carubv10007581m.g Capsella rubella Carubv10007581m.g I 0.661
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.661
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.661
Carubv10013107m.g Capsella rubella Carubv10013107m.g I 0.661
PK26059.1 Cannabis sativa PK26059.1 I 0.661
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.661
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.661
OB02G42700 Oryza brachyantha OB02G42700 I 0.661
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.661
MLOC_11341 Hordeum vulgare MLOC_11341 I 0.661
GSMUA_Achr9G16610_001 Musa acuminata GSMUA_Achr9G16610_001 I 0.661
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.661
OB06G14930 Oryza brachyantha OB06G14930 I 0.661
OBART06G05360 Oryza barthii OBART06G05360 I 0.661
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.661
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.661
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.661
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.661
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.661
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.661
GRMZM2G409974 Zea mays GRMZM2G409974 I 0.661
Bo3g068550 Brassica oleracea Bo3g068550 I 0.661
Bo5g123620 Brassica oleracea Bo5g123620 I 0.661
Bo1g055180 Brassica oleracea Bo1g055180 I 0.661
RR22 Oryza indica BGIOSGA022430 I 0.661
ARR1 Arabidopsis thaliana AT3G16857 D 0.661
RR23 Oryza indica BGIOSGA005436 I 0.661
Bra001643 Brassica rapa Bra001643 I 0.661
Bra022183 Brassica rapa Bra022183 I 0.661
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.661
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.661
ARR1 Arabidopsis lyrata fgenesh2_kg.3__1853__AT3G16857.2 I 0.661
F775_19079 Aegilops tauschii F775_19079 I 0.661
Bra033527 Brassica rapa Bra033527 I 0.661
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.661
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.661
TCM_036926 Theobroma cacao TCM_036926 I 0.661
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.661
TCM_021300 Theobroma cacao TCM_021300 I 0.661
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.661
Si016546m.g Setaria italica Si016546m.g I 0.661
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.661
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.661
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.661
Cla022101 Citrullus lanatus Cla022101 I 0.661
29889.m003245 Ricinus communis 29889.m003245 I 0.661
Cla009424 Citrullus lanatus Cla009424 I 0.661
Ca_02989 Cicer arietinum Ca_02989 I 0.661
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.661
Si006013m.g Setaria italica Si006013m.g I 0.661
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.661
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.661
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.661
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.661
RR22 Oryza sativa OS06G0183100 I 0.661
RR23 Oryza sativa OS02G0796500 I 0.661
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.661
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.661
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.661
SELMODRAFT_447635 Selaginella moellendorffii SELMODRAFT_447635 I 0.661
ARR2 Arabidopsis lyrata scaffold_702902.1 I 0.661
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.661
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.661
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.661