MTR_7g026400 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_7g026400 T274916_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.688 0.660
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.662 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES78253 Myb 159 209

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA16G32311 Glycine max GLYMA16G32311 I 0.794
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.769
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.761
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.761
TCM_015085 Theobroma cacao TCM_015085 I 0.760
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.757
Ca_20899 Cicer arietinum Ca_20899 I 0.753
GLYMA09G27151 Glycine max GLYMA09G27151 N 0.750
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.746
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.743
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.743
Pm027701 Prunus mume Pm027701 I 0.743
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.743
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.743
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.743
MTR_0450s0040 Medicago truncatula MTR_0450s0040 I 0.742
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.736
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.729
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.729
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.729
Ca_15151 Cicer arietinum Ca_15151 I 0.729
MDP0000124301 Malus domestica MDP0000124301 I 0.729
MDP0000155328 Malus domestica MDP0000155328 I 0.729
chr4.CM0042.1440.nc Lotus japonicus chr4.CM0042.1440.nc I 0.729
Bo2g028820 Brassica oleracea Bo2g028820 I 0.728
Bra020390 Brassica rapa Bra020390 I 0.728
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.728
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.728
TCM_037098 Theobroma cacao TCM_037098 I 0.728
29737.m001227 Ricinus communis 29737.m001227 I 0.728
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.728
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.728
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.728
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.728
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.728
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.728
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.728
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.728
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.726
Ca_14780 Cicer arietinum Ca_14780 I 0.726
Pm005877 Prunus mume Pm005877 I 0.726
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.720
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.720
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.720
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.720
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.718
Cla007104 Citrullus lanatus Cla007104 N 0.718
cassava35050.m1 Manihot esculenta cassava35050.m1 N 0.718
evm.TU.supercontig_107.3 Carica papaya evm.TU.supercontig_107.3 N 0.718
Ciclev10006586m.g Citrus clementina Ciclev10006586m.g N 0.697
orange1.1g040406m.g Citrus sinensis orange1.1g040406m.g N 0.697
LjSGA_066155.1 Lotus japonicus LjSGA_066155.1 I 0.693
ARR18 Arabidopsis lyrata Al_scaffold_0008_2276 I 0.688
ARR18 Arabidopsis thaliana AT5G58080 D 0.688
TRIUR3_30130 Triticum urartu TRIUR3_30130 I 0.688
cassava21270.m1 Manihot esculenta cassava21270.m1 N 0.687
VIT_16s0100g00430 Vitis vinifera VIT_16s0100g00430 N 0.684
MTR_2g034960 Medicago truncatula MTR_2g034960 I 0.683
MDP0000311914 Malus domestica MDP0000311914 I 0.683
LjSGA_125152.1 Lotus japonicus LjSGA_125152.1 I 0.683
Bo7g003410 Brassica oleracea Bo7g003410 I 0.682
Bo8g102300 Brassica oleracea Bo8g102300 I 0.682
Bra031129 Brassica rapa Bra031129 I 0.682
PRUPE_ppa023185mg Prunus persica PRUPE_ppa023185mg N 0.682
30147.m014309 Ricinus communis 30147.m014309 N 0.682
mgf018042m Mimulus guttatus mgf018042m N 0.682
mgf019327m Mimulus guttatus mgf019327m N 0.682
gene13325-v1.0-hybrid Fragaria vesca gene13325-v1.0-hybrid N 0.682
SELMODRAFT_447635 Selaginella moellendorffii SELMODRAFT_447635 I 0.680
Cagra.6496s0001 Capsella grandiflora Cagra.6496s0001 N 0.670
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.668
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.668
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.668
F775_03134 Aegilops tauschii F775_03134 I 0.667
F775_03846 Aegilops tauschii F775_03846 I 0.667
TRIUR3_20429 Triticum urartu TRIUR3_20429 I 0.667
TRIUR3_25232 Triticum urartu TRIUR3_25232 I 0.667
GLYMA05G34516 Glycine max GLYMA05G34516 I 0.666
Ciclev10006834m.g Citrus clementina Ciclev10006834m.g N 0.666
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.666
orange1.1g043479m.g Citrus sinensis orange1.1g043479m.g N 0.666
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.665
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.665
ARR1 Arabidopsis thaliana AT3G16857 D 0.662
Bo3g068550 Brassica oleracea Bo3g068550 I 0.662
Bo5g123620 Brassica oleracea Bo5g123620 I 0.662
Bra001643 Brassica rapa Bra001643 I 0.662
Bra022183 Brassica rapa Bra022183 I 0.662
ARR1 Arabidopsis lyrata fgenesh2_kg.3__1853__AT3G16857.2 I 0.662
Bostr.28625s0008 Boechera stricta Bostr.28625s0008 I 0.662
Cagra.5497s0018 Capsella grandiflora Cagra.5497s0018 I 0.662
Carubv10013107m.g Capsella rubella Carubv10013107m.g I 0.662
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.662