TCM_015085 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_015085 T280499_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.742 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY23087 Myb 234 284

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.827
Bo2g028820 Brassica oleracea Bo2g028820 I 0.781
Bra020390 Brassica rapa Bra020390 I 0.781
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.781
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.781
TCM_037098 Theobroma cacao TCM_037098 I 0.781
29737.m001227 Ricinus communis 29737.m001227 I 0.781
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.781
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.781
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.781
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.781
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.781
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.781
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.778
Ca_20899 Cicer arietinum Ca_20899 I 0.775
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.774
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.774
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.774
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.774
TRIUR3_30130 Triticum urartu TRIUR3_30130 I 0.770
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.770
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.770
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.766
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.766
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.766
Pm027701 Prunus mume Pm027701 I 0.766
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.766
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.766
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.766
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.766
MTR_0450s0040 Medicago truncatula MTR_0450s0040 I 0.765
MTR_7g026400 Medicago truncatula MTR_7g026400 I 0.760
PRUPE_ppa023185mg Prunus persica PRUPE_ppa023185mg N 0.760
30147.m014309 Ricinus communis 30147.m014309 N 0.760
mgf018042m Mimulus guttatus mgf018042m N 0.760
gene13325-v1.0-hybrid Fragaria vesca gene13325-v1.0-hybrid N 0.760
GLYMA16G32311 Glycine max GLYMA16G32311 I 0.751
F775_03134 Aegilops tauschii F775_03134 I 0.749
F775_03846 Aegilops tauschii F775_03846 I 0.749
TRIUR3_20429 Triticum urartu TRIUR3_20429 I 0.749
TRIUR3_25232 Triticum urartu TRIUR3_25232 I 0.749
cassava35050.m1 Manihot esculenta cassava35050.m1 N 0.745
Ciclev10006586m.g Citrus clementina Ciclev10006586m.g N 0.745
orange1.1g040406m.g Citrus sinensis orange1.1g040406m.g N 0.745
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.743
ARR18 Arabidopsis lyrata Al_scaffold_0008_2276 I 0.742
ARR18 Arabidopsis thaliana AT5G58080 D 0.742
GLYMA09G27151 Glycine max GLYMA09G27151 N 0.741
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.734
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.734
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.734
Ca_15151 Cicer arietinum Ca_15151 I 0.734
MDP0000124301 Malus domestica MDP0000124301 I 0.734
MDP0000155328 Malus domestica MDP0000155328 I 0.734
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.731
Ca_14780 Cicer arietinum Ca_14780 I 0.731
Pm005877 Prunus mume Pm005877 I 0.731
LjSGA_066155.1 Lotus japonicus LjSGA_066155.1 I 0.728
evm.TU.supercontig_107.3 Carica papaya evm.TU.supercontig_107.3 N 0.727
mgf019327m Mimulus guttatus mgf019327m N 0.726
LjSGA_125152.1 Lotus japonicus LjSGA_125152.1 I 0.725
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.721
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.721
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.721
POPTR_0012s13900 Populus trichocarpa POPTR_0012s13900 N 0.720
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.717
Cla006313 Citrullus lanatus Cla006313 N 0.714
Cucsa.251000 Cucumis sativus Cucsa.251000 N 0.714
orange1.1g009670m.g Citrus sinensis orange1.1g009670m.g I 0.714
chr4.CM0042.1440.nc Lotus japonicus chr4.CM0042.1440.nc I 0.707
GLYMA05G34516 Glycine max GLYMA05G34516 I 0.704
LjSGA_060038.1 Lotus japonicus LjSGA_060038.1 I 0.702
POPTR_0015s13860 Populus trichocarpa POPTR_0015s13860 I 0.701
VIT_16s0100g00430 Vitis vinifera VIT_16s0100g00430 N 0.698
cassava21270.m1 Manihot esculenta cassava21270.m1 N 0.696
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.693
Cla007104 Citrullus lanatus Cla007104 N 0.693
Ca_03351 Cicer arietinum Ca_03351 I 0.692
RR23 Oryza indica BGIOSGA005436 I 0.689
RR22 Oryza indica BGIOSGA022430 I 0.689
F775_14758 Aegilops tauschii F775_14758 I 0.689
F775_19079 Aegilops tauschii F775_19079 I 0.689
GRMZM2G409974 Zea mays GRMZM2G409974 I 0.689
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.689
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.689
MLOC_11341 Hordeum vulgare MLOC_11341 I 0.689
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.689
OB02G42700 Oryza brachyantha OB02G42700 I 0.689
OB06G14930 Oryza brachyantha OB06G14930 I 0.689
OBART06G05360 Oryza barthii OBART06G05360 I 0.689
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.689
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.689
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.689
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.689
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.689
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.689
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.689
RR23 Oryza sativa OS02G0796500 I 0.689
RR22 Oryza sativa OS06G0183100 I 0.689
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.689
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.689
Si006013m.g Setaria italica Si006013m.g I 0.689
Si016546m.g Setaria italica Si016546m.g I 0.689
TCM_036926 Theobroma cacao TCM_036926 I 0.689
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.689
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.689
Traes_7DS_327FBC2CA Triticum aestivum Traes_7DS_327FBC2CA I 0.689
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.689
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.689
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.689
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.689
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.689
MTR_2g034960 Medicago truncatula MTR_2g034960 I 0.688
MDP0000311914 Malus domestica MDP0000311914 I 0.688
Lus10019058.g Linum usitatissimum Lus10019058.g I 0.687
GSMUA_Achr3G14630_001 Musa acuminata GSMUA_Achr3G14630_001 I 0.686
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.685
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.685
MLOC_12999 Hordeum vulgare MLOC_12999 N 0.682
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I 0.682
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.681
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.681
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.681
PRUPE_ppa024819mg Prunus persica PRUPE_ppa024819mg I 0.681
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.681
Cla021325 Citrullus lanatus Cla021325 I 0.681
Pm005710 Prunus mume Pm005710 I 0.681
29848.m004559 Ricinus communis 29848.m004559 I 0.681
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.681
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.681
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.681
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.681
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.681
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.681
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.681
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.681
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.681
Ciclev10006834m.g Citrus clementina Ciclev10006834m.g N 0.680
orange1.1g043479m.g Citrus sinensis orange1.1g043479m.g N 0.680
Sb05g004150 Sorghum bicolor Sb05g004150 I 0.679
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.677
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.677
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.677
mgf001591m Mimulus guttatus mgf001591m I 0.677
mgf014863m Mimulus guttatus mgf014863m I 0.677
MDP0000228719 Malus domestica MDP0000228719 N 0.677
IGS.gm_5_00099 Chlorella NC64A IGS.gm_5_00099 N 0.672
GLYMA05G34523 Glycine max GLYMA05G34523 N 0.670
Si007844m.g Setaria italica Si007844m.g I 0.669
Cucsa.350850 Cucumis sativus Cucsa.350850 I 0.669
Eucgr.C04050 Eucalyptus grandis Eucgr.C04050 I 0.668
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.667
Bo9g175250 Brassica oleracea Bo9g175250 N 0.666
Bra009284 Brassica rapa Bra009284 N 0.666
Thhalv10016040m.g Eutrema salsugineum Thhalv10016040m.g N 0.666
APRR4 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8000961 I 0.663
F775_03300 Aegilops tauschii F775_03300 I 0.662
Traes_7AS_503B57D77 Triticum aestivum Traes_7AS_503B57D77 I 0.662