CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.251000
(
Cucumis sativus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cucsa.251000
T284476_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.251000.1
Myb
189
239
KVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Cucumis sativus
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla006313
Citrullus lanatus
Cla006313
N
0.909
30147.m014309
Ricinus communis
30147.m014309
N
0.803
Ciclev10006586m.g
Citrus clementina
Ciclev10006586m.g
N
0.803
orange1.1g040406m.g
Citrus sinensis
orange1.1g040406m.g
N
0.803
cassava35050.m1
Manihot esculenta
cassava35050.m1
N
0.781
Ciclev10006834m.g
Citrus clementina
Ciclev10006834m.g
N
0.768
orange1.1g043479m.g
Citrus sinensis
orange1.1g043479m.g
N
0.768
VIT_16s0100g00430
Vitis vinifera
VIT_16s0100g00430
N
0.760
PRUPE_ppa023185mg
Prunus persica
PRUPE_ppa023185mg
N
0.754
gene13325-v1.0-hybrid
Fragaria vesca
gene13325-v1.0-hybrid
N
0.754
mgf019327m
Mimulus guttatus
mgf019327m
N
0.750
cassava21270.m1
Manihot esculenta
cassava21270.m1
N
0.745
evm.TU.supercontig_107.3
Carica papaya
evm.TU.supercontig_107.3
N
0.745
POPTR_0015s13860
Populus trichocarpa
POPTR_0015s13860
I
0.743
mgf018042m
Mimulus guttatus
mgf018042m
N
0.736
MDP0000228719
Malus domestica
MDP0000228719
N
0.732
GLYMA16G32311
Glycine max
GLYMA16G32311
I
0.731
MTR_0450s0040
Medicago truncatula
MTR_0450s0040
I
0.727
GLYMA09G27151
Glycine max
GLYMA09G27151
N
0.721
gene03235-v1.0-hybrid
Fragaria vesca
gene03235-v1.0-hybrid
N
0.721
TCM_015085
Theobroma cacao
TCM_015085
I
0.714
Gorai.008G280500
Gossypium raimondii
Gorai.008G280500
I
0.714
SapurV1A.0400s0190
Salix purpurea
SapurV1A.0400s0190
N
0.714
VIT_16s0100g00420
Vitis vinifera
VIT_16s0100g00420
I
0.711
Cla007104
Citrullus lanatus
Cla007104
N
0.711
Cagra.6496s0001
Capsella grandiflora
Cagra.6496s0001
N
0.710
Carubv10007858m.g
Capsella rubella
Carubv10007858m.g
N
0.710
POPTR_0012s13900
Populus trichocarpa
POPTR_0012s13900
N
0.701
Bo9g175250
Brassica oleracea
Bo9g175250
N
0.690
Bra009284
Brassica rapa
Bra009284
N
0.690
Ca_20899
Cicer arietinum
Ca_20899
I
0.690
Thhalv10016040m.g
Eutrema salsugineum
Thhalv10016040m.g
N
0.690
ARR21
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6000557
N
0.682
Bostr.13129s0247
Boechera stricta
Bostr.13129s0247
N
0.682
Carubv10003421m.g
Capsella rubella
Carubv10003421m.g
N
0.682
orange1.1g009670m.g
Citrus sinensis
orange1.1g009670m.g
I
0.679
IGS.gm_5_00099
Chlorella NC64A
IGS.gm_5_00099
N
0.669
TRIUR3_30130
Triticum urartu
TRIUR3_30130
I
0.668
Carubv10006317m.g
Capsella rubella
Carubv10006317m.g
N
0.662