MTR_0450s0040 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_0450s0040 T274674_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.681 0.638
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH15897 Myb 171 221

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA16G32311 Glycine max GLYMA16G32311 I 0.787
GLYMA09G27151 Glycine max GLYMA09G27151 N 0.777
TCM_015085 Theobroma cacao TCM_015085 I 0.765
30147.m014309 Ricinus communis 30147.m014309 N 0.758
Ciclev10006586m.g Citrus clementina Ciclev10006586m.g N 0.758
orange1.1g040406m.g Citrus sinensis orange1.1g040406m.g N 0.758
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.747
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.746
Ca_20899 Cicer arietinum Ca_20899 I 0.746
MTR_7g026400 Medicago truncatula MTR_7g026400 I 0.742
cassava35050.m1 Manihot esculenta cassava35050.m1 N 0.736
evm.TU.supercontig_107.3 Carica papaya evm.TU.supercontig_107.3 N 0.736
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.736
POPTR_0015s13860 Populus trichocarpa POPTR_0015s13860 I 0.734
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.728
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.728
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.728
Ca_15151 Cicer arietinum Ca_15151 I 0.728
MDP0000124301 Malus domestica MDP0000124301 I 0.728
MDP0000155328 Malus domestica MDP0000155328 I 0.728
chr4.CM0042.1440.nc Lotus japonicus chr4.CM0042.1440.nc I 0.728
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.728
Cla006313 Citrullus lanatus Cla006313 N 0.727
Cucsa.251000 Cucumis sativus Cucsa.251000 N 0.727
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.726
Pm005877 Prunus mume Pm005877 I 0.726
mgf019327m Mimulus guttatus mgf019327m N 0.724
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.720
Bo2g028820 Brassica oleracea Bo2g028820 I 0.720
Bra020390 Brassica rapa Bra020390 I 0.720
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.720
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.720
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.720
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.720
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.720
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.720
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.720
TCM_037098 Theobroma cacao TCM_037098 I 0.720
Pm027701 Prunus mume Pm027701 I 0.720
29737.m001227 Ricinus communis 29737.m001227 I 0.720
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.720
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.720
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.720
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.720
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.720
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.720
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.720
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.720
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.720
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.720
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.720
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.720
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.720
Ca_14780 Cicer arietinum Ca_14780 I 0.718
PRUPE_ppa023185mg Prunus persica PRUPE_ppa023185mg N 0.709
mgf018042m Mimulus guttatus mgf018042m N 0.709
gene13325-v1.0-hybrid Fragaria vesca gene13325-v1.0-hybrid N 0.709
F775_03134 Aegilops tauschii F775_03134 I 0.702
F775_03846 Aegilops tauschii F775_03846 I 0.702
TRIUR3_20429 Triticum urartu TRIUR3_20429 I 0.702
TRIUR3_25232 Triticum urartu TRIUR3_25232 I 0.702
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.702
Cla007104 Citrullus lanatus Cla007104 N 0.702
Ciclev10006834m.g Citrus clementina Ciclev10006834m.g N 0.693
MDP0000228719 Malus domestica MDP0000228719 N 0.693
orange1.1g043479m.g Citrus sinensis orange1.1g043479m.g N 0.693
VIT_16s0100g00430 Vitis vinifera VIT_16s0100g00430 N 0.689
IGS.gm_5_00099 Chlorella NC64A IGS.gm_5_00099 N 0.684
MDP0000311914 Malus domestica MDP0000311914 I 0.682
LjSGA_125152.1 Lotus japonicus LjSGA_125152.1 I 0.682
ARR18 Arabidopsis lyrata Al_scaffold_0008_2276 I 0.681
ARR18 Arabidopsis thaliana AT5G58080 D 0.681
TRIUR3_30130 Triticum urartu TRIUR3_30130 I 0.681
GLYMA05G34516 Glycine max GLYMA05G34516 I 0.676
MTR_2g034960 Medicago truncatula MTR_2g034960 I 0.676
POPTR_0012s13900 Populus trichocarpa POPTR_0012s13900 N 0.674
LjSGA_066155.1 Lotus japonicus LjSGA_066155.1 I 0.674