Cla014359 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla014359 T283253_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.702 0.774
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.702 0.774
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.699 0.785
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.691 0.753
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.691 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla014359 Myb 14 61
Cla014359 Myb 67 112

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS07G0558100 Oryza sativa OS07G0558100 I 0.737
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.737
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.737
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.734
GRMZM2G166337 Zea mays GRMZM2G166337 I 0.734
LPERR07G15930 Leersia perrieri LPERR07G15930 I 0.734
OBART07G18450 Oryza barthii OBART07G18450 I 0.734
OGLUM07G18250 Oryza glumaepatula OGLUM07G18250 I 0.734
OMERI07G15370 Oryza meridionalis OMERI07G15370 I 0.734
ONIVA06G20400 Oryza nivara ONIVA06G20400 I 0.734
OPUNC07G17410 Oryza punctata OPUNC07G17410 I 0.734
ORGLA07G0148800 Oryza glaberrima ORGLA07G0148800 I 0.734
ORUFI07G19200 Oryza rufipogon ORUFI07G19200 I 0.734
POPTR_0002s09720 Populus trichocarpa POPTR_0002s09720 I 0.734
Si030273m.g Setaria italica Si030273m.g I 0.734
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.734
Bo9g076410 Brassica oleracea Bo9g076410 I 0.726
Bra029553 Brassica rapa Bra029553 I 0.726
GSMUA_Achr1G23990_001 Musa acuminata GSMUA_Achr1G23990_001 I 0.720
GSMUA_Achr9G12180_001 Musa acuminata GSMUA_Achr9G12180_001 I 0.719
BRADI1G24887 Brachypodium distachyon BRADI1G24887 I 0.717
MLOC_62436 Hordeum vulgare MLOC_62436 I 0.717
LjSGA_022617.1 Lotus japonicus LjSGA_022617.1 I 0.713
OB07G24240 Oryza brachyantha OB07G24240 I 0.710
evm.TU.supercontig_27.135 Carica papaya evm.TU.supercontig_27.135 I 0.710
evm.TU.supercontig_752.1 Carica papaya evm.TU.supercontig_752.1 I 0.710
Solyc10g005460.2 Solanum lycopersicum Solyc10g005460.2 I 0.708
Gorai.009G281000 Gossypium raimondii Gorai.009G281000 I 0.707
GLYMA12G11600 Glycine max GLYMA12G11600 I 0.705
GSMUA_AchrUn_randomG07900_001 Musa acuminata GSMUA_AchrUn_randomG07900_001 I 0.703
VIT_07s0141g00100 Vitis vinifera VIT_07s0141g00100 I 0.703
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I 0.702
AtMYB74 Arabidopsis thaliana AT4G05100 D 0.702
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.702
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I 0.702
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I 0.702
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I 0.702
TCM_030009 Theobroma cacao TCM_030009 I 0.702
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I 0.702
Cla001360 Citrullus lanatus Cla001360 I 0.702
cassava19500.valid.m1 Manihot esculenta cassava19500.valid.m1 I 0.702
Cucsa.045790 Cucumis sativus Cucsa.045790 I 0.702
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I 0.702
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I 0.702
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I 0.702
F775_02918 Aegilops tauschii F775_02918 I 0.701
Solyc04g056310.2 Solanum lycopersicum Solyc04g056310.2 I 0.701
Traes_2DS_49959692B1 Triticum aestivum Traes_2DS_49959692B1 I 0.701
Traes_2DS_49959692B Triticum aestivum Traes_2DS_49959692B I 0.701
Cla014358 Citrullus lanatus Cla014358 I 0.701
Cucsa.104340 Cucumis sativus Cucsa.104340 I 0.701
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.701
Eucgr.I00442 Eucalyptus grandis Eucgr.I00442 I 0.701
PGSC0003DMG400011250 Solanum tuberosum PGSC0003DMG400011250 I 0.700
GLYMA08G06440 Glycine max GLYMA08G06440 I 0.699
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I 0.699
POPTR_0013s14480 Populus trichocarpa POPTR_0013s14480 I 0.699
Pm009892 Prunus mume Pm009892 I 0.699
mgf018114m Mimulus guttatus mgf018114m I 0.699
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I 0.699
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I 0.699
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I 0.699
Gorai.005G206300 Gossypium raimondii Gorai.005G206300 I 0.699
MDP0000492221 Malus domestica MDP0000492221 I 0.699
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I 0.699
GLYMA06G10840 Glycine max GLYMA06G10840 I 0.698
MTR_3g074520 Medicago truncatula MTR_3g074520 I 0.698
cassava41325.m1 Manihot esculenta cassava41325.m1 I 0.698
Eucgr.B00023 Eucalyptus grandis Eucgr.B00023 I 0.698
Lus10006740.g Linum usitatissimum Lus10006740.g I 0.698
Lus10020085.g Linum usitatissimum Lus10020085.g I 0.698
SapurV1A.0028s0230 Salix purpurea SapurV1A.0028s0230 I 0.698
SapurV1A.0048s0210 Salix purpurea SapurV1A.0048s0210 I 0.698
Bostr.2983s0050 Boechera stricta Bostr.2983s0050 I 0.695
GLYMA02G13770 Glycine max GLYMA02G13770 I 0.694
Traes_2AS_FA7059723 Triticum aestivum Traes_2AS_FA7059723 I 0.694
cassava2558.valid.m1 Manihot esculenta cassava2558.valid.m1 I 0.693
cassava39892.m1 Manihot esculenta cassava39892.m1 I 0.693
Ciclev10017668m.g Citrus clementina Ciclev10017668m.g I 0.693
Eucgr.A01772 Eucalyptus grandis Eucgr.A01772 I 0.693
Gorai.010G149300 Gossypium raimondii Gorai.010G149300 I 0.693
orange1.1g035629m.g Citrus sinensis orange1.1g035629m.g I 0.693
MYB39 Arabidopsis thaliana AT4G17785 D 0.691
Bostr.30275s0243 Boechera stricta Bostr.30275s0243 I 0.691
PRUPE_ppa007438mg Prunus persica PRUPE_ppa007438mg I 0.690
TCM_007904 Theobroma cacao TCM_007904 I 0.690
AtMYB41 Vitis vinifera VIT_12s0134g00570 I 0.690
Cagra.1981s0006 Capsella grandiflora Cagra.1981s0006 I 0.690
Carubv10001366m.g Capsella rubella Carubv10001366m.g I 0.690
Gorai.008G151400 Gossypium raimondii Gorai.008G151400 I 0.690
Lus10011820.g Linum usitatissimum Lus10011820.g I 0.690
GLYMA04G11040 Glycine max GLYMA04G11040 I 0.689
VIT_11s0078g00480 Vitis vinifera VIT_11s0078g00480 I 0.686
GLYMA13G32090 Glycine max GLYMA13G32090 I 0.685
GLYMA15G07230 Glycine max GLYMA15G07230 I 0.685
MTR_2g011660 Medicago truncatula MTR_2g011660 I 0.685
Ca_00232 Cicer arietinum Ca_00232 I 0.685
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.684
GLYMA03G41100 Glycine max GLYMA03G41100 I 0.682
GLYMA19G43740 Glycine max GLYMA19G43740 I 0.682
Sb06g023620 Sorghum bicolor Sb06g023620 I 0.682
Lus10039743.g Linum usitatissimum Lus10039743.g I 0.682
GLYMA06G45460 Glycine max GLYMA06G45460 I 0.681
mgf023669m Mimulus guttatus mgf023669m I 0.681
mgf025298m Mimulus guttatus mgf025298m I 0.681
mgf026502m Mimulus guttatus mgf026502m I 0.681
GSMUA_Achr10G19130_001 Musa acuminata GSMUA_Achr10G19130_001 I 0.680
Thhalv10018933m.g Eutrema salsugineum Thhalv10018933m.g I 0.679
GSMUA_Achr5G18080_001 Musa acuminata GSMUA_Achr5G18080_001 I 0.677
POPTR_0005s07590 Populus trichocarpa POPTR_0005s07590 I 0.677
PRUPE_ppa019923mg Prunus persica PRUPE_ppa019923mg I 0.677
TCM_001102 Theobroma cacao TCM_001102 I 0.677
TCM_034902 Theobroma cacao TCM_034902 I 0.677
Pm002011 Prunus mume Pm002011 I 0.677
Ciclev10003958m.g Citrus clementina Ciclev10003958m.g I 0.677
gene16287-v1.0-hybrid Fragaria vesca gene16287-v1.0-hybrid I 0.677
Gorai.003G039500 Gossypium raimondii Gorai.003G039500 I 0.677
MDP0000228252 Malus domestica MDP0000228252 I 0.677
MDP0000302984 Malus domestica MDP0000302984 I 0.677
MDP0000320772 Malus domestica MDP0000320772 I 0.677
orange1.1g037998m.g Citrus sinensis orange1.1g037998m.g I 0.677
SapurV1A.0403s0220 Salix purpurea SapurV1A.0403s0220 I 0.677
SapurV1A.1088s0050 Salix purpurea SapurV1A.1088s0050 I 0.677
SapurV1A.2488s0010 Salix purpurea SapurV1A.2488s0010 I 0.677
SapurV1A.3561s0010 Salix purpurea SapurV1A.3561s0010 I 0.677
Bo1g017860 Brassica oleracea Bo1g017860 I 0.676
Bra021033 Brassica rapa Bra021033 I 0.676
Bra040181 Brassica rapa Bra040181 I 0.676
MDP0000289283 Malus domestica MDP0000289283 I 0.676
Thhalv10026921m.g Eutrema salsugineum Thhalv10026921m.g I 0.676
MYB39 Arabidopsis lyrata fgenesh2_kg.7__2528__AT4G17785.1 I 0.674
MTR_4g091490 Medicago truncatula MTR_4g091490 I 0.674
Cagra.3356s0071 Capsella grandiflora Cagra.3356s0071 I 0.674
Carubv10006864m.g Capsella rubella Carubv10006864m.g I 0.674
Bo1g051220 Brassica oleracea Bo1g051220 I 0.672
Bra026281 Brassica rapa Bra026281 I 0.672
PGSC0003DMG400026628 Solanum tuberosum PGSC0003DMG400026628 I 0.672
Solyc10g008700.1 Solanum lycopersicum Solyc10g008700.1 I 0.672
Cla019747 Citrullus lanatus Cla019747 I 0.672
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.672
Gorai.011G023800 Gossypium raimondii Gorai.011G023800 I 0.672
Pavir.Ga01101 Panicum virgatum Pavir.Ga01101 I 0.672
Pavir.Gb00736 Panicum virgatum Pavir.Gb00736 I 0.672
Thhalv10027463m.g Eutrema salsugineum Thhalv10027463m.g I 0.672
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I 0.671
OB06G17320 Oryza brachyantha OB06G17320 I 0.670
BGIOSGA016822 Oryza indica BGIOSGA016822 I 0.669
GSMUA_Achr6G29310_001 Musa acuminata GSMUA_Achr6G29310_001 I 0.669
MLOC_68698 Hordeum vulgare MLOC_68698 I 0.669
OB04G26860 Oryza brachyantha OB04G26860 I 0.669
ONIVA04G17990 Oryza nivara ONIVA04G17990 I 0.669
ORGLA04G0169000 Oryza glaberrima ORGLA04G0169000 I 0.669
ORUFI04G21320 Oryza rufipogon ORUFI04G21320 I 0.669
Traes_2AL_41B71F83C Triticum aestivum Traes_2AL_41B71F83C I 0.669
Traes_2BL_79F1B50DF Triticum aestivum Traes_2BL_79F1B50DF I 0.669
Traes_2DL_5A0300CE0 Triticum aestivum Traes_2DL_5A0300CE0 I 0.669
Ca_11494 Cicer arietinum Ca_11494 I 0.669
Cla007838 Citrullus lanatus Cla007838 I 0.669
Cucsa.148040 Cucumis sativus Cucsa.148040 I 0.669
Gorai.013G088400 Gossypium raimondii Gorai.013G088400 I 0.669
AMTR_s00038p00183620 Amborella trichopoda AMTR_s00038p00183620 I 0.668
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I 0.668
Solyc05g051550.1 Solanum lycopersicum Solyc05g051550.1 I 0.668
MYB39 Vitis vinifera VIT_02s0012g01650 I 0.668
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.668
POPTR_0003s09300 Populus trichocarpa POPTR_0003s09300 I 0.667
GSMUA_Achr10G25700_001 Musa acuminata GSMUA_Achr10G25700_001 I 0.666
Solyc08g076700.1 Solanum lycopersicum Solyc08g076700.1 I 0.666
AtMYB93 Vitis vinifera VIT_18s0001g05670 I 0.666
Ca_22021 Cicer arietinum Ca_22021 I 0.666
OMERI06G09300 Oryza meridionalis OMERI06G09300 I 0.665
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.665
GLYMA01G09280 Glycine max GLYMA01G09280 I 0.664
OB08G25790 Oryza brachyantha OB08G25790 I 0.664
OGLUM08G19650 Oryza glumaepatula OGLUM08G19650 I 0.664
OMERI08G14710 Oryza meridionalis OMERI08G14710 I 0.664
ONIVA08G20680 Oryza nivara ONIVA08G20680 I 0.664
ORGLA08G0162300 Oryza glaberrima ORGLA08G0162300 I 0.664
ORUFI08G20890 Oryza rufipogon ORUFI08G20890 I 0.664
Si008086m.g Setaria italica Si008086m.g I 0.664
cassava3286.m1 Manihot esculenta cassava3286.m1 I 0.664
Eucgr.B03684 Eucalyptus grandis Eucgr.B03684 I 0.664
Pavir.Fb01820 Panicum virgatum Pavir.Fb01820 I 0.664
PGSC0003DMG400018331 Solanum tuberosum PGSC0003DMG400018331 I 0.663
POPTR_0019s14070 Populus trichocarpa POPTR_0019s14070 I 0.663
Solyc07g054840.2 Solanum lycopersicum Solyc07g054840.2 I 0.663
29983.m003281 Ricinus communis 29983.m003281 I 0.663
mgf012840m Mimulus guttatus mgf012840m I 0.663
Bostr.3288s0058 Boechera stricta Bostr.3288s0058 I 0.663
TCM_011658 Theobroma cacao TCM_011658 I 0.662
cassava17115.m1 Manihot esculenta cassava17115.m1 I 0.662
Cla013669 Citrullus lanatus Cla013669 I 0.661
MDP0000215675 Malus domestica MDP0000215675 I 0.661