GLYMA06G45460 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA06G45460 T271377_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.796 0.882
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.796 0.882
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.766 0.892
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.762 0.849
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.721 0.839
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.721 0.839
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.677 0.753
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.677 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA06G45460.1 Myb 14 61
GLYMA06G45460.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Glycine max TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA12G11600 Glycine max GLYMA12G11600 I 0.845
Gorai.008G151400 Gossypium raimondii Gorai.008G151400 I 0.841
TCM_007904 Theobroma cacao TCM_007904 I 0.823
Eucgr.A01772 Eucalyptus grandis Eucgr.A01772 I 0.820
POPTR_0013s14480 Populus trichocarpa POPTR_0013s14480 I 0.814
AtMYB41 Vitis vinifera VIT_12s0134g00570 I 0.811
cassava2558.valid.m1 Manihot esculenta cassava2558.valid.m1 I 0.811
cassava39892.m1 Manihot esculenta cassava39892.m1 I 0.811
Cucsa.148040 Cucumis sativus Cucsa.148040 I 0.811
Ciclev10017668m.g Citrus clementina Ciclev10017668m.g I 0.811
orange1.1g035629m.g Citrus sinensis orange1.1g035629m.g I 0.811
Gorai.005G206300 Gossypium raimondii Gorai.005G206300 I 0.810
Cagra.1981s0006 Capsella grandiflora Cagra.1981s0006 I 0.799
Carubv10001366m.g Capsella rubella Carubv10001366m.g I 0.799
AtMYB74 Arabidopsis thaliana AT4G05100 D 0.796
SapurV1A.0048s0210 Salix purpurea SapurV1A.0048s0210 I 0.791
Lus10006740.g Linum usitatissimum Lus10006740.g I 0.782
PGSC0003DMG400018331 Solanum tuberosum PGSC0003DMG400018331 I 0.781
PGSC0003DMG400026628 Solanum tuberosum PGSC0003DMG400026628 I 0.781
Solyc07g054840.2 Solanum lycopersicum Solyc07g054840.2 I 0.781
Solyc10g008700.1 Solanum lycopersicum Solyc10g008700.1 I 0.781
Cla007838 Citrullus lanatus Cla007838 I 0.781
29983.m003281 Ricinus communis 29983.m003281 I 0.781
Bo1g051220 Brassica oleracea Bo1g051220 I 0.779
Bra026281 Brassica rapa Bra026281 I 0.779
GLYMA08G06440 Glycine max GLYMA08G06440 I 0.779
Thhalv10027463m.g Eutrema salsugineum Thhalv10027463m.g I 0.779
Lus10039743.g Linum usitatissimum Lus10039743.g I 0.775
MDP0000468201 Malus domestica MDP0000468201 I 0.769
MDP0000710259 Malus domestica MDP0000710259 I 0.769
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I 0.766
Bo9g076410 Brassica oleracea Bo9g076410 I 0.766
Bra029553 Brassica rapa Bra029553 I 0.766
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.766
GRMZM2G166337 Zea mays GRMZM2G166337 I 0.766
LPERR07G15930 Leersia perrieri LPERR07G15930 I 0.766
OBART07G18450 Oryza barthii OBART07G18450 I 0.766
OGLUM07G18250 Oryza glumaepatula OGLUM07G18250 I 0.766
OMERI07G15370 Oryza meridionalis OMERI07G15370 I 0.766
ONIVA06G20400 Oryza nivara ONIVA06G20400 I 0.766
OPUNC07G17410 Oryza punctata OPUNC07G17410 I 0.766
ORGLA07G0148800 Oryza glaberrima ORGLA07G0148800 I 0.766
ORUFI07G19200 Oryza rufipogon ORUFI07G19200 I 0.766
OS07G0558100 Oryza sativa OS07G0558100 I 0.766
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I 0.766
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I 0.766
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I 0.766
PRUPE_ppa007438mg Prunus persica PRUPE_ppa007438mg I 0.766
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.766
Si030273m.g Setaria italica Si030273m.g I 0.766
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I 0.766
TCM_030009 Theobroma cacao TCM_030009 I 0.766
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I 0.766
Cla001360 Citrullus lanatus Cla001360 I 0.766
Pm009892 Prunus mume Pm009892 I 0.766
cassava19500.valid.m1 Manihot esculenta cassava19500.valid.m1 I 0.766
Cucsa.045790 Cucumis sativus Cucsa.045790 I 0.766
mgf018114m Mimulus guttatus mgf018114m I 0.766
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I 0.766
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I 0.766
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I 0.766
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I 0.766
Gorai.010G149300 Gossypium raimondii Gorai.010G149300 I 0.766
MDP0000492221 Malus domestica MDP0000492221 I 0.766
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I 0.766
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.766
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.766
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I 0.766
Bostr.2983s0050 Boechera stricta Bostr.2983s0050 I 0.764
evm.TU.supercontig_27.135 Carica papaya evm.TU.supercontig_27.135 I 0.764
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I 0.763
AtMYB41 Arabidopsis thaliana AT4G28110 D 0.762
Bo7g111870 Brassica oleracea Bo7g111870 I 0.762
Bra024224 Brassica rapa Bra024224 I 0.762
Bostr.7867s0646 Boechera stricta Bostr.7867s0646 I 0.762
Cagra.1225s0085 Capsella grandiflora Cagra.1225s0085 I 0.762
Carubv10007810m.g Capsella rubella Carubv10007810m.g I 0.762
SapurV1A.0028s0230 Salix purpurea SapurV1A.0028s0230 I 0.762
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.760
POPTR_0019s14070 Populus trichocarpa POPTR_0019s14070 I 0.759
AtMYB41 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001108 I 0.758
Lus10020085.g Linum usitatissimum Lus10020085.g I 0.758
Ca_14119 Cicer arietinum Ca_14119 I 0.756
chr3.CM0711.160.nd Lotus japonicus chr3.CM0711.160.nd I 0.756
mgf023669m Mimulus guttatus mgf023669m I 0.753
mgf025298m Mimulus guttatus mgf025298m I 0.753
mgf026502m Mimulus guttatus mgf026502m I 0.753
PGSC0003DMG400011250 Solanum tuberosum PGSC0003DMG400011250 I 0.751
BRADI1G24887 Brachypodium distachyon BRADI1G24887 I 0.749
MLOC_62436 Hordeum vulgare MLOC_62436 I 0.749
MTR_2g089620 Medicago truncatula MTR_2g089620 I 0.748
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.746
GLYMA13G32090 Glycine max GLYMA13G32090 I 0.745
GLYMA15G07230 Glycine max GLYMA15G07230 I 0.745
MTR_2g011660 Medicago truncatula MTR_2g011660 I 0.745
Ca_00232 Cicer arietinum Ca_00232 I 0.745
OB07G24240 Oryza brachyantha OB07G24240 I 0.742
SapurV1A.1088s0050 Salix purpurea SapurV1A.1088s0050 I 0.742
SapurV1A.3561s0010 Salix purpurea SapurV1A.3561s0010 I 0.742
GLYMA13G37820 Glycine max GLYMA13G37820 I 0.741
GLYMA12G32610 Glycine max GLYMA12G32610 I 0.740
SapurV1A.0417s0210 Salix purpurea SapurV1A.0417s0210 I 0.739
evm.TU.supercontig_34.69 Carica papaya evm.TU.supercontig_34.69 I 0.738
Gorai.011G023800 Gossypium raimondii Gorai.011G023800 I 0.736
Bo1g024170 Brassica oleracea Bo1g024170 I 0.734
Bra013526 Brassica rapa Bra013526 I 0.734
MTR_4g091490 Medicago truncatula MTR_4g091490 I 0.734
Ca_22021 Cicer arietinum Ca_22021 I 0.732
Cla019747 Citrullus lanatus Cla019747 I 0.732
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.732
GSMUA_Achr9G12180_001 Musa acuminata GSMUA_Achr9G12180_001 I 0.730
cassava41325.m1 Manihot esculenta cassava41325.m1 I 0.728
MLOC_68698 Hordeum vulgare MLOC_68698 I 0.725
Traes_2AL_41B71F83C Triticum aestivum Traes_2AL_41B71F83C I 0.725
Traes_2AS_FA7059723 Triticum aestivum Traes_2AS_FA7059723 I 0.725
Traes_2BL_79F1B50DF Triticum aestivum Traes_2BL_79F1B50DF I 0.725
Traes_2DL_5A0300CE0 Triticum aestivum Traes_2DL_5A0300CE0 I 0.725
PRUPE_ppa016708mg Prunus persica PRUPE_ppa016708mg I 0.724
Pm015309 Prunus mume Pm015309 I 0.724
gene01992-v1.0-hybrid Fragaria vesca gene01992-v1.0-hybrid I 0.724
Gorai.012G132200 Gossypium raimondii Gorai.012G132200 I 0.723
MYB49 Arabidopsis thaliana AT5G54230 D 0.721
Bo3g022210 Brassica oleracea Bo3g022210 I 0.721
Bra029033 Brassica rapa Bra029033 I 0.721
fgenesh1_pg.C_scaffold_8001466 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001466 I 0.721
fgenesh1_pm.C_scaffold_8001114 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001114 I 0.721
Bostr.26833s0846 Boechera stricta Bostr.26833s0846 I 0.721
Cagra.1629s0007 Capsella grandiflora Cagra.1629s0007 I 0.721
Carubv10026801m.g Capsella rubella Carubv10026801m.g I 0.721
F775_02918 Aegilops tauschii F775_02918 I 0.720
Traes_2DS_49959692B1 Triticum aestivum Traes_2DS_49959692B1 I 0.720
Traes_2DS_49959692B Triticum aestivum Traes_2DS_49959692B I 0.720
Lus10002593.g Linum usitatissimum Lus10002593.g I 0.720
Lus10018418.g Linum usitatissimum Lus10018418.g I 0.719
Solyc10g005460.2 Solanum lycopersicum Solyc10g005460.2 I 0.718
ATMYB102 Arabidopsis thaliana AT4G21440 I 0.717
Bo3g162580 Brassica oleracea Bo3g162580 I 0.717
Bra020892 Brassica rapa Bra020892 I 0.717
Bra038774 Brassica rapa Bra038774 I 0.717
ATMYB102 Arabidopsis lyrata fgenesh2_kg.7__2173__AT4G21440.1 I 0.717
Cagra.2455s0004 Capsella grandiflora Cagra.2455s0004 I 0.717
Carubv10004873m.g Capsella rubella Carubv10004873m.g I 0.717
Thhalv10027571m.g Eutrema salsugineum Thhalv10027571m.g I 0.717
Bo7g107420 Brassica oleracea Bo7g107420 I 0.713
GLYMA02G12242 Glycine max GLYMA02G12242 I 0.712
AMTR_s00003p00271440 Amborella trichopoda AMTR_s00003p00271440 I 0.709
Bostr.10689s0089 Boechera stricta Bostr.10689s0089 I 0.708
e_gw1.317.17.1 Physcomitrella patens e_gw1.317.17.1 I 0.707
Pavir.Ga01101 Panicum virgatum Pavir.Ga01101 I 0.707
Pavir.Gb00736 Panicum virgatum Pavir.Gb00736 I 0.707
GSMUA_Achr2G02970_001 Musa acuminata GSMUA_Achr2G02970_001 I 0.705
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I 0.704
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I 0.704
Thhalv10014125m.g Eutrema salsugineum Thhalv10014125m.g I 0.704
POPTR_0003s09300 Populus trichocarpa POPTR_0003s09300 I 0.700
BRADI5G16707 Brachypodium distachyon BRADI5G16707 I 0.695
MTR_5g029840 Medicago truncatula MTR_5g029840 I 0.695
Gorai.004G183600 Gossypium raimondii Gorai.004G183600 I 0.694
GSMUA_Achr1G23990_001 Musa acuminata GSMUA_Achr1G23990_001 I 0.691
Gorai.004G183500 Gossypium raimondii Gorai.004G183500 I 0.691
GLYMA13G09010 Glycine max GLYMA13G09010 I 0.689
Aquca_038_00198 Aquilegia coerulea Aquca_038_00198 I 0.688
MYB49 Vitis vinifera VIT_19s0014g03820 I 0.687
estExt_gwp_gw1.C_20043 Physcomitrella patens estExt_gwp_gw1.C_20043 I 0.685
Sb06g023620 Sorghum bicolor Sb06g023620 I 0.684
GSMUA_Achr5G18080_001 Musa acuminata GSMUA_Achr5G18080_001 I 0.683
POPTR_0011s12750 Populus trichocarpa POPTR_0011s12750 I 0.682
BGIOSGA016822 Oryza indica BGIOSGA016822 I 0.681
GSMUA_Achr9G14850_001 Musa acuminata GSMUA_Achr9G14850_001 I 0.681
OB04G26860 Oryza brachyantha OB04G26860 I 0.681
ONIVA04G17990 Oryza nivara ONIVA04G17990 I 0.681
ORGLA04G0169000 Oryza glaberrima ORGLA04G0169000 I 0.681
ORUFI04G21320 Oryza rufipogon ORUFI04G21320 I 0.681
Cla014359 Citrullus lanatus Cla014359 I 0.681
Gorai.013G088400 Gossypium raimondii Gorai.013G088400 I 0.681
SapurV1A.0495s0050 Salix purpurea SapurV1A.0495s0050 I 0.681
SapurV1A.4146s0010 Salix purpurea SapurV1A.4146s0010 I 0.681
Gorai.002G077200 Gossypium raimondii Gorai.002G077200 I 0.680
MDP0000145050 Malus domestica MDP0000145050 I 0.680
GSMUA_Achr6G29310_001 Musa acuminata GSMUA_Achr6G29310_001 I 0.679
GSMUA_AchrUn_randomG07900_001 Musa acuminata GSMUA_AchrUn_randomG07900_001 I 0.679
Pm023191 Prunus mume Pm023191 I 0.678
MYB39 Arabidopsis thaliana AT4G17785 D 0.677
Bo1g017860 Brassica oleracea Bo1g017860 I 0.677
Bra040181 Brassica rapa Bra040181 I 0.677
Bostr.30275s0243 Boechera stricta Bostr.30275s0243 I 0.677
Thhalv10026921m.g Eutrema salsugineum Thhalv10026921m.g I 0.677
Bo6g077600 Brassica oleracea Bo6g077600 I 0.675
Bra021033 Brassica rapa Bra021033 I 0.674
Eucgr.B00023 Eucalyptus grandis Eucgr.B00023 I 0.674
SELMODRAFT_38058 Selaginella moellendorffii SELMODRAFT_38058 I 0.673
TCM_016551 Theobroma cacao TCM_016551 I 0.673
MDP0000144751 Malus domestica MDP0000144751 I 0.673
LjSGA_022617.1 Lotus japonicus LjSGA_022617.1 I 0.673
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.672
POPTR_0019s06290 Populus trichocarpa POPTR_0019s06290 I 0.672
GLYMA08G17861 Glycine max GLYMA08G17861 I 0.671
evm.TU.supercontig_12.22 Carica papaya evm.TU.supercontig_12.22 I 0.670
e_gw1.106.133.1 Physcomitrella patens e_gw1.106.133.1 I 0.669
e_gw1.326.5.1 Physcomitrella patens e_gw1.326.5.1 I 0.669
Ciclev10009050m.g Citrus clementina Ciclev10009050m.g I 0.669
orange1.1g045387m.g Citrus sinensis orange1.1g045387m.g I 0.669
GLYMA12G34650 Glycine max GLYMA12G34650 I 0.668
GLYMA13G35810 Glycine max GLYMA13G35810 I 0.668
Eucgr.F01069 Eucalyptus grandis Eucgr.F01069 I 0.668
SapurV1A.0151s0280 Salix purpurea SapurV1A.0151s0280 I 0.668
GSMUA_Achr9G24560_001 Musa acuminata GSMUA_Achr9G24560_001 I 0.667
AMTR_s00038p00183620 Amborella trichopoda AMTR_s00038p00183620 I 0.666
GSMUA_Achr10G19130_001 Musa acuminata GSMUA_Achr10G19130_001 I 0.666
OB06G17320 Oryza brachyantha OB06G17320 I 0.666
POPTR_0005s07590 Populus trichocarpa POPTR_0005s07590 I 0.666
PRUPE_ppa019923mg Prunus persica PRUPE_ppa019923mg I 0.666
TCM_001102 Theobroma cacao TCM_001102 I 0.666
TCM_034902 Theobroma cacao TCM_034902 I 0.666
VIT_07s0141g00100 Vitis vinifera VIT_07s0141g00100 I 0.666
Pm002011 Prunus mume Pm002011 I 0.666
e_gw1.45.189.1 Physcomitrella patens e_gw1.45.189.1 I 0.666
evm.TU.supercontig_752.1 Carica papaya evm.TU.supercontig_752.1 I 0.666
gene16287-v1.0-hybrid Fragaria vesca gene16287-v1.0-hybrid I 0.666
Gorai.009G281000 Gossypium raimondii Gorai.009G281000 I 0.666
MDP0000228252 Malus domestica MDP0000228252 I 0.666
MDP0000302984 Malus domestica MDP0000302984 I 0.666
MDP0000320772 Malus domestica MDP0000320772 I 0.666
SapurV1A.0403s0220 Salix purpurea SapurV1A.0403s0220 I 0.666
SapurV1A.2488s0010 Salix purpurea SapurV1A.2488s0010 I 0.666
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.665
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.665
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I 0.665
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.665
TCM_004046 Theobroma cacao TCM_004046 I 0.665
Pm020596 Prunus mume Pm020596 I 0.665
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.665
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.665
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.664
TCM_011658 Theobroma cacao TCM_011658 I 0.664
Ca_11494 Cicer arietinum Ca_11494 I 0.664
Solyc08g076700.1 Solanum lycopersicum Solyc08g076700.1 I 0.663
Cagra.3356s0071 Capsella grandiflora Cagra.3356s0071 I 0.663
Carubv10006864m.g Capsella rubella Carubv10006864m.g I 0.663
OB08G25790 Oryza brachyantha OB08G25790 I 0.662
OGLUM08G19650 Oryza glumaepatula OGLUM08G19650 I 0.662
OMERI06G09300 Oryza meridionalis OMERI06G09300 I 0.662
OMERI08G14710 Oryza meridionalis OMERI08G14710 I 0.662
ONIVA08G20680 Oryza nivara ONIVA08G20680 I 0.662
ORGLA08G0162300 Oryza glaberrima ORGLA08G0162300 I 0.662
ORUFI08G20890 Oryza rufipogon ORUFI08G20890 I 0.662
PRUPE_ppa021577mg Prunus persica PRUPE_ppa021577mg I 0.662
Si008086m.g Setaria italica Si008086m.g I 0.662
Pm011657 Prunus mume Pm011657 I 0.662
MDP0000289283 Malus domestica MDP0000289283 I 0.662
Pavir.Fb01820 Panicum virgatum Pavir.Fb01820 I 0.662
BRADI1G51747 Brachypodium distachyon BRADI1G51747 I 0.661
Si006790m.g Setaria italica Si006790m.g I 0.661
TCM_031294 Theobroma cacao TCM_031294 I 0.661
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.661
Pavir.J23197 Panicum virgatum Pavir.J23197 I 0.661
SapurV1A.0483s0100 Salix purpurea SapurV1A.0483s0100 I 0.661