Sb06g023620 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb06g023620 T279248_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.687 0.763
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.684 0.742
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.684 0.742
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.663 0.731
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.663 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb06g023620.1 Myb 14 61
Sb06g023620.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA016822 Oryza indica BGIOSGA016822 I 0.842
MLOC_68698 Hordeum vulgare MLOC_68698 I 0.842
OB04G26860 Oryza brachyantha OB04G26860 I 0.842
ONIVA04G17990 Oryza nivara ONIVA04G17990 I 0.842
ORGLA04G0169000 Oryza glaberrima ORGLA04G0169000 I 0.842
ORUFI04G21320 Oryza rufipogon ORUFI04G21320 I 0.842
Traes_2BL_79F1B50DF Triticum aestivum Traes_2BL_79F1B50DF I 0.842
Traes_2DL_5A0300CE0 Triticum aestivum Traes_2DL_5A0300CE0 I 0.842
Traes_2AL_41B71F83C Triticum aestivum Traes_2AL_41B71F83C I 0.825
Pavir.Ga01101 Panicum virgatum Pavir.Ga01101 I 0.816
Pavir.Gb00736 Panicum virgatum Pavir.Gb00736 I 0.816
BRADI5G16707 Brachypodium distachyon BRADI5G16707 I 0.809
GRMZM2G123202 Zea mays GRMZM2G123202 N 0.809
Si017934m.g Setaria italica Si017934m.g I 0.783
Pavir.Ab02419 Panicum virgatum Pavir.Ab02419 I 0.783
Pavir.Aa01232 Panicum virgatum Pavir.Aa01232 I 0.780
BGIOSGA008700 Oryza indica BGIOSGA008700 I 0.766
OB02G32960 Oryza brachyantha OB02G32960 I 0.766
ORUFI02G27000 Oryza rufipogon ORUFI02G27000 I 0.766
OS02G0641900 Oryza sativa OS02G0641900 I 0.766
Sb04g033670 Sorghum bicolor Sb04g033670 I 0.753
PRUPE_ppa016708mg Prunus persica PRUPE_ppa016708mg I 0.739
Pm015309 Prunus mume Pm015309 I 0.739
GRMZM2G040924 Zea mays GRMZM2G040924 I 0.736
GRMZM2G111045 Zea mays GRMZM2G111045 I 0.736
GSMUA_Achr11G04090_001 Musa acuminata GSMUA_Achr11G04090_001 I 0.721
MLOC_39554 Hordeum vulgare MLOC_39554 I 0.721
Eucgr.A01772 Eucalyptus grandis Eucgr.A01772 I 0.714
Bo6g077600 Brassica oleracea Bo6g077600 I 0.709
POPTR_0013s14480 Populus trichocarpa POPTR_0013s14480 I 0.709
F775_27854 Aegilops tauschii F775_27854 I 0.701
Traes_6DL_41CBE9959 Triticum aestivum Traes_6DL_41CBE9959 I 0.701
Cagra.1981s0006 Capsella grandiflora Cagra.1981s0006 I 0.693
Carubv10001366m.g Capsella rubella Carubv10001366m.g I 0.693
Gorai.010G149300 Gossypium raimondii Gorai.010G149300 I 0.693
GSMUA_Achr5G12230_001 Musa acuminata GSMUA_Achr5G12230_001 I 0.692
Bostr.2983s0050 Boechera stricta Bostr.2983s0050 I 0.691
Gorai.005G206300 Gossypium raimondii Gorai.005G206300 I 0.689
BRADI3G49987 Brachypodium distachyon BRADI3G49987 I 0.688
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.687
GRMZM2G166337 Zea mays GRMZM2G166337 I 0.687
LPERR07G15930 Leersia perrieri LPERR07G15930 I 0.687
OB07G24240 Oryza brachyantha OB07G24240 I 0.687
OBART07G18450 Oryza barthii OBART07G18450 I 0.687
OGLUM07G18250 Oryza glumaepatula OGLUM07G18250 I 0.687
OMERI07G15370 Oryza meridionalis OMERI07G15370 I 0.687
ONIVA06G20400 Oryza nivara ONIVA06G20400 I 0.687
OPUNC07G17410 Oryza punctata OPUNC07G17410 I 0.687
ORGLA07G0148800 Oryza glaberrima ORGLA07G0148800 I 0.687
ORUFI07G19200 Oryza rufipogon ORUFI07G19200 I 0.687
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I 0.687
Si030273m.g Setaria italica Si030273m.g I 0.687
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I 0.687
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I 0.687
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I 0.687
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.687
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I 0.687
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I 0.684
AtMYB74 Arabidopsis thaliana AT4G05100 D 0.684
Bo9g076410 Brassica oleracea Bo9g076410 I 0.684
Bra029553 Brassica rapa Bra029553 I 0.684
GLYMA06G45460 Glycine max GLYMA06G45460 I 0.684
OS07G0558100 Oryza sativa OS07G0558100 I 0.684
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I 0.684
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I 0.684
PRUPE_ppa007438mg Prunus persica PRUPE_ppa007438mg I 0.684
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.684
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I 0.684
TCM_007904 Theobroma cacao TCM_007904 I 0.684
TCM_030009 Theobroma cacao TCM_030009 I 0.684
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I 0.684
AtMYB41 Vitis vinifera VIT_12s0134g00570 I 0.684
Cla001360 Citrullus lanatus Cla001360 I 0.684
Pm009892 Prunus mume Pm009892 I 0.684
cassava19500.valid.m1 Manihot esculenta cassava19500.valid.m1 I 0.684
cassava2558.valid.m1 Manihot esculenta cassava2558.valid.m1 I 0.684
cassava39892.m1 Manihot esculenta cassava39892.m1 I 0.684
Cucsa.045790 Cucumis sativus Cucsa.045790 I 0.684
mgf018114m Mimulus guttatus mgf018114m I 0.684
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I 0.684
Ciclev10017668m.g Citrus clementina Ciclev10017668m.g I 0.684
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I 0.684
MDP0000492221 Malus domestica MDP0000492221 I 0.684
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I 0.684
orange1.1g035629m.g Citrus sinensis orange1.1g035629m.g I 0.684
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.684
SapurV1A.1088s0050 Salix purpurea SapurV1A.1088s0050 I 0.684
SapurV1A.3561s0010 Salix purpurea SapurV1A.3561s0010 I 0.684
BRADI1G51747 Brachypodium distachyon BRADI1G51747 I 0.683
Si006790m.g Setaria italica Si006790m.g I 0.683
Pavir.J23197 Panicum virgatum Pavir.J23197 I 0.683
Cla014359 Citrullus lanatus Cla014359 I 0.682
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.681
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.680
GLYMA08G06440 Glycine max GLYMA08G06440 I 0.680
GLYMA12G11600 Glycine max GLYMA12G11600 I 0.680
evm.TU.supercontig_27.135 Carica papaya evm.TU.supercontig_27.135 I 0.680
SapurV1A.0028s0230 Salix purpurea SapurV1A.0028s0230 I 0.680
Ca_14119 Cicer arietinum Ca_14119 I 0.679
chr3.CM0711.160.nd Lotus japonicus chr3.CM0711.160.nd I 0.679
evm.TU.supercontig_18.232 Carica papaya evm.TU.supercontig_18.232 I 0.677
Lus10006740.g Linum usitatissimum Lus10006740.g I 0.676
Lus10020085.g Linum usitatissimum Lus10020085.g I 0.676
Pavir.Da02398 Panicum virgatum Pavir.Da02398 I 0.676
SapurV1A.0048s0210 Salix purpurea SapurV1A.0048s0210 I 0.676
BRADI3G38807 Brachypodium distachyon BRADI3G38807 I 0.675
F775_20865 Aegilops tauschii F775_20865 N 0.675
GLYMA12G32610 Glycine max GLYMA12G32610 I 0.675
GSMUA_Achr1G23990_001 Musa acuminata GSMUA_Achr1G23990_001 I 0.674
Aquca_013_00356 Aquilegia coerulea Aquca_013_00356 I 0.674
Gorai.008G151400 Gossypium raimondii Gorai.008G151400 I 0.673
SapurV1A.0024s0060 Salix purpurea SapurV1A.0024s0060 I 0.673
BRADI1G24887 Brachypodium distachyon BRADI1G24887 I 0.670
MLOC_62436 Hordeum vulgare MLOC_62436 I 0.670
Eucgr.D02271 Eucalyptus grandis Eucgr.D02271 I 0.670
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.670
gene01992-v1.0-hybrid Fragaria vesca gene01992-v1.0-hybrid I 0.670
MDP0000468201 Malus domestica MDP0000468201 I 0.670
MDP0000710259 Malus domestica MDP0000710259 I 0.670
GSMUA_Achr6G04130_001 Musa acuminata GSMUA_Achr6G04130_001 I 0.668
OBART06G20450 Oryza barthii OBART06G20450 I 0.667
OGLUM06G21530 Oryza glumaepatula OGLUM06G21530 I 0.667
OLONG_019401 Oryza longistaminata OLONG_019401 I 0.667
OMERI06G21070 Oryza meridionalis OMERI06G21070 I 0.667
ONIVA06G24230 Oryza nivara ONIVA06G24230 I 0.667
OPUNC06G18670 Oryza punctata OPUNC06G18670 I 0.667
ORGLA06G0168900 Oryza glaberrima ORGLA06G0168900 I 0.667
ORUFI06G21880 Oryza rufipogon ORUFI06G21880 I 0.667
PGSC0003DMG400011250 Solanum tuberosum PGSC0003DMG400011250 I 0.667
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.667
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.667
GSMUA_Achr10G19130_001 Musa acuminata GSMUA_Achr10G19130_001 I 0.665
cassava27189.m1 Manihot esculenta cassava27189.m1 I 0.664
MYB39 Arabidopsis thaliana AT4G17785 D 0.663
Bo1g017860 Brassica oleracea Bo1g017860 I 0.663
Bra021033 Brassica rapa Bra021033 I 0.663
Bra040181 Brassica rapa Bra040181 I 0.663
GLYMA13G32090 Glycine max GLYMA13G32090 I 0.663
GLYMA15G07230 Glycine max GLYMA15G07230 I 0.663
MTR_2g011660 Medicago truncatula MTR_2g011660 I 0.663
POPTR_0012s13240 Populus trichocarpa POPTR_0012s13240 I 0.663
Ca_00232 Cicer arietinum Ca_00232 I 0.663
Bostr.30275s0243 Boechera stricta Bostr.30275s0243 I 0.663
SapurV1A.1253s0080 Salix purpurea SapurV1A.1253s0080 I 0.663
Thhalv10026921m.g Eutrema salsugineum Thhalv10026921m.g I 0.663
AtMYB93 Vitis vinifera VIT_18s0001g05670 I 0.662
Cla021563 Citrullus lanatus Cla021563 I 0.662
Cucsa.258270 Cucumis sativus Cucsa.258270 I 0.662
Bra003443 Brassica rapa Bra003443 I 0.661
GLYMA13G37820 Glycine max GLYMA13G37820 I 0.661
LPERR06G17110 Leersia perrieri LPERR06G17110 N 0.661
MTR_2g089620 Medicago truncatula MTR_2g089620 I 0.661
Thhalv10006126m.g Eutrema salsugineum Thhalv10006126m.g I 0.661