CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.F03656
(
Eucalyptus grandis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Eucgr.F03656
T286874_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB80
M07142_2.00
Arabidopsis thaliana
NYYYACCTAMYWHNN
NNDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MS188_col_a
0.836
0.914
MYB80
M07143_2.00
Arabidopsis thaliana
YYYACCTAMYTWNNN
NNNWARKTAGGTRRR
Dap-seq
OMalley et al.(2016)
MS188_colamp_a
0.836
0.914
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.F03656.1
Myb
14
61
RGQWTPEEDNKLASYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYL
Eucgr.F03656.1
Myb
67
112
HGEFSEAEEQTIMRLHAVLGNRWSIIAAQLPGRTDNDVKNYWNTKL
Links
Other
Myb/SANT
family TFs
Other
Eucalyptus grandis
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_005_00315
Aquilegia coerulea
Aquca_005_00315
I
0.901
TCM_030529
Theobroma cacao
TCM_030529
I
0.886
OMERI04G13500
Oryza meridionalis
OMERI04G13500
I
0.884
ONIVA04G13800
Oryza nivara
ONIVA04G13800
I
0.884
OGLUM04G15520
Oryza glumaepatula
OGLUM04G15520
I
0.884
OB04G23000
Oryza brachyantha
OB04G23000
I
0.884
Pavir.Ga01401
Panicum virgatum
Pavir.Ga01401
I
0.884
OPUNC04G13560
Oryza punctata
OPUNC04G13560
I
0.884
Sb06g019650
Sorghum bicolor
Sb06g019650
I
0.884
TRIUR3_35325
Triticum urartu
TRIUR3_35325
I
0.884
Traes_2BL_361925B62
Triticum aestivum
Traes_2BL_361925B62
I
0.884
Si012130m.g
Setaria italica
Si012130m.g
I
0.884
GRMZM2G173633
Zea mays
GRMZM2G173633
I
0.884
ORUFI04G17000
Oryza rufipogon
ORUFI04G17000
I
0.884
ORGLA04G0126700
Oryza glaberrima
ORGLA04G0126700
I
0.884
BGIOSGA014912
Oryza indica
BGIOSGA014912
I
0.884
F775_22620
Aegilops tauschii
F775_22620
I
0.884
LPERR04G12420
Leersia perrieri
LPERR04G12420
I
0.875
MTR_3g461490
Medicago truncatula
MTR_3g461490
I
0.868
Gorai.009G454000
Gossypium raimondii
Gorai.009G454000
I
0.868
PRUPE_ppa021719mg
Prunus persica
PRUPE_ppa021719mg
I
0.868
Ca_17657
Cicer arietinum
Ca_17657
I
0.868
AtMYB103
Vitis vinifera
VIT_19s0015g01280
I
0.868
Cucsa.041880
Cucumis sativus
Cucsa.041880
I
0.868
GLYMA18G07960
Glycine max
GLYMA18G07960
I
0.868
cassava33918.m1
Manihot esculenta
cassava33918.m1
I
0.868
PGSC0003DMG400008687
Solanum tuberosum
PGSC0003DMG400008687
I
0.867
Solyc10g005760.1
Solanum lycopersicum
Solyc10g005760.1
I
0.867
SapurV1A.0395s0050
Salix purpurea
SapurV1A.0395s0050
I
0.866
BGIOSGA030830
Oryza indica
BGIOSGA030830
I
0.864
BRADI5G13041
Brachypodium distachyon
BRADI5G13041
I
0.863
gene01457-v1.0-hybrid
Fragaria vesca
gene01457-v1.0-hybrid
I
0.862
Ciclev10008921m.g
Citrus clementina
Ciclev10008921m.g
I
0.861
POPTR_0011s17060
Populus trichocarpa
POPTR_0011s17060
I
0.859
Cla004524
Citrullus lanatus
Cla004524
I
0.858
POPTR_0001s47430
Populus trichocarpa
POPTR_0001s47430
I
0.849
Bostr.26833s0652
Boechera stricta
Bostr.26833s0652
I
0.845
SapurV1A.0338s0180
Salix purpurea
SapurV1A.0338s0180
I
0.844
evm.TU.supercontig_12.83
Carica papaya
evm.TU.supercontig_12.83
I
0.844
Traes_2DL_A03AB7608
Triticum aestivum
Traes_2DL_A03AB7608
I
0.839
Carubv10027619m.g
Capsella rubella
Carubv10027619m.g
I
0.836
Al_scaffold_0008_2049
Arabidopsis lyrata
Al_scaffold_0008_2049
I
0.836
MYB80
Arabidopsis thaliana
AT5G56110
D
0.836
Thhalv10015622m.g
Eutrema salsugineum
Thhalv10015622m.g
I
0.836
Cagra.3745s0008
Capsella grandiflora
Cagra.3745s0008
I
0.836
Bra002847
Brassica rapa
Bra002847
I
0.836
AtMYB103
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8001268
I
0.832
Bo9g123440
Brassica oleracea
Bo9g123440
I
0.825
Bra035604
Brassica rapa
Bra035604
I
0.819
Bo2g036530
Brassica oleracea
Bo2g036530
I
0.799
Pavir.J28142
Panicum virgatum
Pavir.J28142
I
0.769
MTR_4g097570
Medicago truncatula
MTR_4g097570
I
0.689
Solyc04g077260.2
Solanum lycopersicum
Solyc04g077260.2
I
0.684
PGSC0003DMG400004948
Solanum tuberosum
PGSC0003DMG400004948
I
0.684
PGSC0003DMG400018331
Solanum tuberosum
PGSC0003DMG400018331
I
0.682
Solyc07g054840.2
Solanum lycopersicum
Solyc07g054840.2
I
0.682
MDP0000262514
Malus domestica
MDP0000262514
I
0.681
PRUPE_ppa024417mg
Prunus persica
PRUPE_ppa024417mg
I
0.681
MDP0000124992
Malus domestica
MDP0000124992
I
0.681
MDP0000786507
Malus domestica
MDP0000786507
I
0.681
GSMUA_Achr6G31740_001
Musa acuminata
GSMUA_Achr6G31740_001
I
0.680
GSMUA_Achr5G01930_001
Musa acuminata
GSMUA_Achr5G01930_001
I
0.680
Solyc02g091980.1
Solanum lycopersicum
Solyc02g091980.1
I
0.679
PGSC0003DMG400021401
Solanum tuberosum
PGSC0003DMG400021401
I
0.679
Lus10013830.g
Linum usitatissimum
Lus10013830.g
I
0.677
POPTR_0011s04000
Populus trichocarpa
POPTR_0011s04000
N
0.677
Lus10026543.g
Linum usitatissimum
Lus10026543.g
I
0.677
GLYMA01G40411
Glycine max
GLYMA01G40411
I
0.674
GSMUA_Achr6G01850_001
Musa acuminata
GSMUA_Achr6G01850_001
I
0.674
Aquca_001_00247
Aquilegia coerulea
Aquca_001_00247
I
0.674
Gorai.009G006700
Gossypium raimondii
Gorai.009G006700
I
0.674
Cla007838
Citrullus lanatus
Cla007838
I
0.673
PGSC0003DMG400026628
Solanum tuberosum
PGSC0003DMG400026628
I
0.673
Gorai.006G162800
Gossypium raimondii
Gorai.006G162800
I
0.673
Solyc10g008700.1
Solanum lycopersicum
Solyc10g008700.1
I
0.673
Cucsa.148040
Cucumis sativus
Cucsa.148040
I
0.673
Bo1g051220
Brassica oleracea
Bo1g051220
I
0.671
Thhalv10027463m.g
Eutrema salsugineum
Thhalv10027463m.g
I
0.671
Bra026281
Brassica rapa
Bra026281
I
0.671
SapurV1A.0004s0360
Salix purpurea
SapurV1A.0004s0360
I
0.670
Cucsa.353120
Cucumis sativus
Cucsa.353120
I
0.670
SapurV1A.0271s0250
Salix purpurea
SapurV1A.0271s0250
I
0.670
Pavir.Ia00427
Panicum virgatum
Pavir.Ia00427
I
0.670
orange1.1g036344m.g
Citrus sinensis
orange1.1g036344m.g
I
0.670
Gorai.009G222900
Gossypium raimondii
Gorai.009G222900
I
0.670
Ciclev10027178m.g
Citrus clementina
Ciclev10027178m.g
I
0.670
Lus10028248.g
Linum usitatissimum
Lus10028248.g
I
0.670
Lus10007248.g
Linum usitatissimum
Lus10007248.g
I
0.670
Si036681m.g
Setaria italica
Si036681m.g
I
0.670
OLONG_025560
Oryza longistaminata
OLONG_025560
I
0.670
OGLUM03G35410
Oryza glumaepatula
OGLUM03G35410
I
0.670
OBART03G35660
Oryza barthii
OBART03G35660
I
0.670
OMERI03G32880
Oryza meridionalis
OMERI03G32880
I
0.670
ONIVA03G37150
Oryza nivara
ONIVA03G37150
I
0.670
ORUFI03G37090
Oryza rufipogon
ORUFI03G37090
I
0.670
ORGLA03G0327000
Oryza glaberrima
ORGLA03G0327000
I
0.670
OB03G42660
Oryza brachyantha
OB03G42660
I
0.670
MTR_5g014990
Medicago truncatula
MTR_5g014990
I
0.670
GLYMA06G05260
Glycine max
GLYMA06G05260
I
0.670
GLYMA04G05170
Glycine max
GLYMA04G05170
I
0.670
BGIOSGA009746
Oryza indica
BGIOSGA009746
I
0.670
GLYMA11G04880
Glycine max
GLYMA11G04880
I
0.670
GLYMA19G36830
Glycine max
GLYMA19G36830
I
0.670
MTR_1g017140
Medicago truncatula
MTR_1g017140
I
0.670
LPERR03G29970
Leersia perrieri
LPERR03G29970
I
0.670
POPTR_0002s11440
Populus trichocarpa
POPTR_0002s11440
I
0.670
OS03G0771100
Oryza sativa
OS03G0771100
I
0.670
Cla014272
Citrullus lanatus
Cla014272
I
0.670
Ca_09203
Cicer arietinum
Ca_09203
I
0.670
Cla021213
Citrullus lanatus
Cla021213
I
0.670
cassava25562.m1
Manihot esculenta
cassava25562.m1
I
0.670
Cucsa.103470
Cucumis sativus
Cucsa.103470
I
0.670
cassava46793.m1
Manihot esculenta
cassava46793.m1
I
0.670
VIT_18s0001g08470
Vitis vinifera
VIT_18s0001g08470
I
0.670
Ca_02249
Cicer arietinum
Ca_02249
I
0.670
TCM_034634
Theobroma cacao
TCM_034634
I
0.670
Sb01g006800
Sorghum bicolor
Sb01g006800
I
0.670
POPTR_0018s10390
Populus trichocarpa
POPTR_0018s10390
I
0.670
MYB36
Vitis vinifera
VIT_11s0052g01490
I
0.670
Cla019747
Citrullus lanatus
Cla019747
I
0.669
Cucsa.126220
Cucumis sativus
Cucsa.126220
I
0.669
GSMUA_Achr10G08350_001
Musa acuminata
GSMUA_Achr10G08350_001
I
0.668
Gorai.004G231100
Gossypium raimondii
Gorai.004G231100
I
0.664
gene28902-v1.0-hybrid
Fragaria vesca
gene28902-v1.0-hybrid
I
0.664
evm.TU.supercontig_160.24
Carica papaya
evm.TU.supercontig_160.24
I
0.661
SapurV1A.0818s0020
Salix purpurea
SapurV1A.0818s0020
I
0.661