Thhalv10011866m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10011866m.g T290019_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.677 0.723
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.677 0.723
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.665 0.638
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10011866m Myb 7 59

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.J02841 Eucalyptus grandis Eucgr.J02841 I 0.800
Thhalv10018950m.g Eutrema salsugineum Thhalv10018950m.g I 0.766
Solyc07g040920.2 Solanum lycopersicum Solyc07g040920.2 I 0.734
Ca_10058 Cicer arietinum Ca_10058 I 0.727
Thhalv10012087m.g Eutrema salsugineum Thhalv10012087m.g I 0.727
chr2.LjT13P17.300.nd Lotus japonicus chr2.LjT13P17.300.nd I 0.726
chr3.LjT02L14.30.nd Lotus japonicus chr3.LjT02L14.30.nd I 0.726
LjSGA_016825.2 Lotus japonicus LjSGA_016825.2 I 0.726
LjSGA_029815.1 Lotus japonicus LjSGA_029815.1 I 0.726
gene07496-v1.0-hybrid Fragaria vesca gene07496-v1.0-hybrid I 0.725
BRADI2G47820 Brachypodium distachyon BRADI2G47820 I 0.721
LPERR01G24270 Leersia perrieri LPERR01G24270 I 0.721
Si002467m.g Setaria italica Si002467m.g I 0.721
Traes_3AL_12B53AB09 Triticum aestivum Traes_3AL_12B53AB09 I 0.721
TRAES3BF075800120CFD_g Triticum aestivum TRAES3BF075800120CFD_g I 0.721
Pavir.Ea02570 Panicum virgatum Pavir.Ea02570 I 0.721
GSMUA_Achr4G08670_001 Musa acuminata GSMUA_Achr4G08670_001 I 0.714
GSMUA_Achr4G09130_001 Musa acuminata GSMUA_Achr4G09130_001 I 0.714
GSMUA_Achr8G24960_001 Musa acuminata GSMUA_Achr8G24960_001 I 0.714
PDK_20s1888511g002 Phoenix dactylifera PDK_20s1888511g002 I 0.714
MTR_2g099610 Medicago truncatula MTR_2g099610 I 0.705
GRMZM2G108424 Zea mays GRMZM2G108424 I 0.703
Sb03g032530 Sorghum bicolor Sb03g032530 I 0.703
Pavir.Eb02802 Panicum virgatum Pavir.Eb02802 I 0.703
MTR_1g041765 Medicago truncatula MTR_1g041765 I 0.692
Cagra.1262s0035 Capsella grandiflora Cagra.1262s0035 I 0.692
Carubv10009763m.g Capsella rubella Carubv10009763m.g I 0.692
Ca_02722 Cicer arietinum Ca_02722 I 0.687
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I 0.686
MLOC_10278 Hordeum vulgare MLOC_10278 I 0.686
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I 0.686
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I 0.686
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I 0.686
TRIUR3_10613 Triticum urartu TRIUR3_10613 I 0.686
Bostr.7128s0053 Boechera stricta Bostr.7128s0053 I 0.686
MDP0000234807 Malus domestica MDP0000234807 I 0.683
POPTR_0018s07040 Populus trichocarpa POPTR_0018s07040 I 0.680
AT1G72740 Arabidopsis thaliana AT1G72740 D 0.677
Bo6g116150 Brassica oleracea Bo6g116150 I 0.677
Bra016037 Brassica rapa Bra016037 I 0.677
fgenesh2_kg.2__1540__AT1G72740.1 Arabidopsis lyrata fgenesh2_kg.2__1540__AT1G72740.1 I 0.677
Cagra.1013s0027 Capsella grandiflora Cagra.1013s0027 I 0.677
Carubv10020636m.g Capsella rubella Carubv10020636m.g I 0.677
Gorai.009G143000 Gossypium raimondii Gorai.009G143000 I 0.677
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I 0.672
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I 0.672
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I 0.672
Bo3g184590 Brassica oleracea Bo3g184590 I 0.666
Bra030894 Brassica rapa Bra030894 I 0.666
GLYMA01G40220 Glycine max GLYMA01G40220 I 0.665
GLYMA05G22500 Glycine max GLYMA05G22500 I 0.665
GLYMA11G05070 Glycine max GLYMA11G05070 I 0.665
GLYMA17G17370 Glycine max GLYMA17G17370 I 0.665
MTR_4g097130 Medicago truncatula MTR_4g097130 I 0.665
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I 0.665
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I 0.665
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I 0.665
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I 0.665
TCM_007242 Theobroma cacao TCM_007242 I 0.665
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I 0.665
TRB1 Vitis vinifera VIT_03s0091g01030 I 0.665
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I 0.665
Ca_02232 Cicer arietinum Ca_02232 I 0.665
Ca_09355 Cicer arietinum Ca_09355 I 0.665
Cla006547 Citrullus lanatus Cla006547 I 0.665
Cla014248 Citrullus lanatus Cla014248 I 0.665
Pm002374 Prunus mume Pm002374 I 0.665
Pm021139 Prunus mume Pm021139 I 0.665
29812.m000204 Ricinus communis 29812.m000204 I 0.665
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I 0.665
Cucsa.103240 Cucumis sativus Cucsa.103240 I 0.665
Cucsa.298390 Cucumis sativus Cucsa.298390 I 0.665
Ciclev10028926m.g Citrus clementina Ciclev10028926m.g I 0.665
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I 0.665
Gorai.005G230800 Gossypium raimondii Gorai.005G230800 I 0.665
Lus10014653.g Linum usitatissimum Lus10014653.g I 0.665
Lus10033775.g Linum usitatissimum Lus10033775.g I 0.665
MDP0000239354 Malus domestica MDP0000239354 I 0.665
orange1.1g022048m.g Citrus sinensis orange1.1g022048m.g I 0.665
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I 0.665
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I 0.665
PK06103.1 Cannabis sativa PK06103.1 D 0.665
PK19870.1 Cannabis sativa PK19870.1 I 0.665
LjT25P15.150.nd Lotus japonicus LjT25P15.150.nd I 0.665
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I 0.665
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I 0.665
GRMZM2G023667 Zea mays GRMZM2G023667 I 0.663